Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_A08
(495 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86; Eukary... 171 7e-42
UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42; Eutele... 121 8e-27
UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7; Dikar... 97 2e-19
UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3; ... 96 3e-19
UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1; ... 77 2e-13
UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor; ... 74 2e-12
UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4; Apicomp... 71 1e-11
UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8; Trypano... 70 3e-11
UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba h... 63 4e-09
UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato... 62 5e-09
UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S riboso... 55 8e-07
UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148, w... 52 9e-06
UniRef50_Q8ZVP1 Cluster: 30S ribosomal protein S25e; n=4; Pyroba... 39 0.071
UniRef50_A7D3C9 Cluster: Putative uncharacterized protein; n=1; ... 35 0.87
UniRef50_Q9Y914 Cluster: 30S ribosomal protein S25e; n=1; Aeropy... 34 2.0
UniRef50_Q98RQ8 Cluster: 40S ribosomal protein S25; n=1; Guillar... 33 2.7
UniRef50_Q0INA0 Cluster: Os12g0489400 protein; n=1; Oryza sativa... 33 2.7
UniRef50_A2BLT6 Cluster: 30S ribosomal protein S25e; n=1; Hypert... 33 2.7
UniRef50_Q1YII8 Cluster: Possible regulatory protein; n=1; Auran... 33 3.5
UniRef50_Q1D826 Cluster: Patatin-like phospholipase family prote... 33 4.6
UniRef50_Q7XWC1 Cluster: OSJNBb0069N01.5 protein; n=1; Oryza sat... 32 6.1
UniRef50_A7ASS7 Cluster: Putative uncharacterized protein; n=1; ... 32 6.1
UniRef50_A1RYY6 Cluster: Small subunit ribosomal protein S25e; n... 32 6.1
UniRef50_UPI0000DA42B8 Cluster: PREDICTED: similar to 40S riboso... 32 8.1
UniRef50_Q0DBZ5 Cluster: Os06g0504100 protein; n=3; Oryza sativa... 32 8.1
UniRef50_P13185 Cluster: Protein kinase KIN1; n=2; Saccharomyces... 32 8.1
>UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86;
Eukaryota|Rep: 40S ribosomal protein S25 - Drosophila
melanogaster (Fruit fly)
Length = 117
Score = 171 bits (416), Expect = 7e-42
Identities = 85/114 (74%), Positives = 90/114 (78%)
Frame = +3
Query: 36 PXKDAKASAKQPQKTQXXXXXXXXXXXXXXXXXXXXVRDKLNNQVLFDKPTYEKLYKEVP 215
P KDAK+SAKQPQKTQ VRDKLNNQVLFDK TYEKLYKEVP
Sbjct: 3 PKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVP 62
Query: 216 QYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGDD 377
YKLITP+VVSERLK+RGSLA+RALIELREKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 63 AYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRATKGDE 116
>UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42;
Euteleostomi|Rep: 40S ribosomal protein S25 - Homo
sapiens (Human)
Length = 125
Score = 121 bits (292), Expect = 8e-27
Identities = 62/81 (76%), Positives = 65/81 (80%)
Frame = +3
Query: 144 VRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQ 323
VRDKLNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL KGLIK
Sbjct: 40 VRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKL 99
Query: 324 VVQHHGQVIYTRATKGDDPVA 386
V +H QVIYTR TKG D A
Sbjct: 100 VSKHRAQVIYTRNTKGGDAPA 120
>UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7;
Dikarya|Rep: Ribosomal protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 107
Score = 97.1 bits (231), Expect = 2e-19
Identities = 43/74 (58%), Positives = 59/74 (79%)
Frame = +3
Query: 144 VRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQ 323
V+DK NN V+ DK Y+++ KEVP YKLI+ +V+ +R+K+ GSLARRA+ L ++GLIK+
Sbjct: 32 VKDKANNAVIVDKAVYDRIIKEVPTYKLISQSVLIDRMKINGSLARRAIAFLEKEGLIKR 91
Query: 324 VVQHHGQVIYTRAT 365
VV HH Q+IYTRAT
Sbjct: 92 VVHHHAQLIYTRAT 105
>UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 234
Score = 96.3 bits (229), Expect = 3e-19
Identities = 44/73 (60%), Positives = 58/73 (79%)
Frame = +3
Query: 147 RDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQV 326
++K+NN VLFD+ TY+KL EVP+YK ITP+V+SERL++ GSLARRA+ +L +GLI+ V
Sbjct: 160 KEKVNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAINDLMTRGLIRMV 219
Query: 327 VQHHGQVIYTRAT 365
H Q IYTRAT
Sbjct: 220 SVHSSQQIYTRAT 232
>UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1;
Babesia bovis|Rep: Ribosomal protein S25 , putative -
Babesia bovis
Length = 104
Score = 77.0 bits (181), Expect = 2e-13
Identities = 36/73 (49%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +3
Query: 147 RDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQV 326
+DK N+ V FDK TY+KL ++P+ +LIT + + ++LKV S+AR+AL L E+ LIK V
Sbjct: 32 KDKANHAVFFDKATYDKLMSDIPKARLITISTIVDKLKVNASMARKALAHLEEQKLIKPV 91
Query: 327 V-QHHGQVIYTRA 362
QHH Q +YT+A
Sbjct: 92 CDQHHAQRLYTKA 104
>UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor;
n=24; Eukaryota|Rep: 40S ribosomal protein S25-A
precursor - Saccharomyces cerevisiae (Baker's yeast)
Length = 108
Score = 74.1 bits (174), Expect = 2e-12
Identities = 32/77 (41%), Positives = 54/77 (70%)
Frame = +3
Query: 144 VRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQ 323
++D+ + V+ D+ Y+++ KEVP Y+ ++ +V+ +RLK+ GSLAR AL L ++G+IK
Sbjct: 32 MKDRAQHAVILDQEKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKEGIIKP 91
Query: 324 VVQHHGQVIYTRATKGD 374
+ +H Q IYTRAT +
Sbjct: 92 ISKHSKQAIYTRATASE 108
>UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4;
Apicomplexa|Rep: 40S ribosomal protein S25 -
Cryptosporidium parvum Iowa II
Length = 106
Score = 71.3 bits (167), Expect = 1e-11
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +3
Query: 147 RDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQV 326
+DK N+ VLFDK T ++ + +V + +L+TPAVV +LKV S AR L + KG+IK V
Sbjct: 34 KDKANHSVLFDKKTADRFHSDVLKSRLLTPAVVVNQLKVNASAARAMLRDCESKGIIKPV 93
Query: 327 -VQHHGQVIYTRA 362
Q HGQ+IYT+A
Sbjct: 94 GEQTHGQMIYTKA 106
>UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8;
Trypanosomatidae|Rep: 40S ribosomal protein S25 -
Leishmania infantum
Length = 120
Score = 69.7 bits (163), Expect = 3e-11
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = +3
Query: 147 RDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQV 326
R+ L N V+FDK TY+KL EVP+YKLITP+++S+RLK+ S+A L +L + LI+ V
Sbjct: 33 REALQNAVMFDKETYDKLRSEVPKYKLITPSIISDRLKIAVSIAAAGLKQLCREKLIRLV 92
Query: 327 VQHHGQVIYTR 359
+YTR
Sbjct: 93 SCSSKTRVYTR 103
>UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba
histolytica|Rep: Ribosomal protein S25 - Entamoeba
histolytica
Length = 129
Score = 62.9 bits (146), Expect = 4e-09
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = +3
Query: 144 VRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQ 323
V++KLNN V+FDK T +K K+VP K+ITP VV++R+ + G+L + L L +K LI
Sbjct: 35 VKEKLNNTVIFDKATLDKCAKDVPSMKVITPPVVADRITITGALGKILLKALDKKELIVP 94
Query: 324 V-VQHHGQVIYTRATK 368
V V +H +V ++R+ K
Sbjct: 95 VKVDYHIRV-FSRSDK 109
>UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato
sp|P46301|RS25_LYCES 40S ribosomal protein S25 p; n=1;
Ostreococcus tauri|Rep: Ribosomal protein S25,
cytosolic-tomato sp|P46301|RS25_LYCES 40S ribosomal
protein S25 p - Ostreococcus tauri
Length = 82
Score = 62.5 bits (145), Expect = 5e-09
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +3
Query: 186 TYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYT 356
TY+KL EVP+YK+IT AV+ +RL++ SLAR+ + L+ KGLIK +V H +YT
Sbjct: 20 TYDKLLAEVPKYKMITTAVLCDRLRITCSLARKGIAILQAKGLIKPLVSHAALNVYT 76
>UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S ribosomal
protein S25; n=4; Euarchontoglires|Rep: PREDICTED:
similar to 40S ribosomal protein S25 - Homo sapiens
Length = 102
Score = 55.2 bits (127), Expect = 8e-07
Identities = 38/76 (50%), Positives = 42/76 (55%)
Frame = +3
Query: 150 DKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVV 329
DKLNNQVLFD T RL++RGSLAR AL EL KGLIK V
Sbjct: 40 DKLNNQVLFDNAT---------------------RLEIRGSLARAALQELLGKGLIKLVS 78
Query: 330 QHHGQVIYTRATKGDD 377
+H +VIYTR TK D
Sbjct: 79 KHRARVIYTRNTKSGD 94
>UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_148,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 204
Score = 51.6 bits (118), Expect = 9e-06
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = +3
Query: 147 RDKLNNQVLFDKPTYEKLYKEVPQY-KLITPAVVSERLKVRGSLARRALIELREKGLIKQ 323
+DKLNN V D +Y+++ ++P+ LIT + VS++ KV GSLARR + + GL+
Sbjct: 100 KDKLNNAVFLDNTSYKQIETQLPKMGALITVSTVSDKFKVNGSLARRCIRHFAKSGLLVP 159
Query: 324 V-VQHHGQVIYT 356
Q+ Q I+T
Sbjct: 160 AGDQNSKQYIFT 171
>UniRef50_Q8ZVP1 Cluster: 30S ribosomal protein S25e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S25e -
Pyrobaculum aerophilum
Length = 110
Score = 38.7 bits (86), Expect = 0.071
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = +3
Query: 165 QVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQ 344
QVL D+ ++ + KEV ++ITP ++ + ++ S+A + L L+E+G + V + H
Sbjct: 43 QVL-DEKVFQAIAKEVQNMRVITPYEIASKYGIKMSVAFKVLRNLKERGDLVLVAKGHRT 101
Query: 345 VIYTRATK 368
IY A +
Sbjct: 102 EIYVPAKR 109
>UniRef50_A7D3C9 Cluster: Putative uncharacterized protein; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: Putative
uncharacterized protein - Halorubrum lacusprofundi ATCC
49239
Length = 330
Score = 35.1 bits (77), Expect = 0.87
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 49 RRLRPNSLKKHRRRRKDPVAAKPRRR 126
RR RP L+ RRRR+D V A+PR R
Sbjct: 93 RRARPRQLRPDRRRRRDAVGARPRPR 118
>UniRef50_Q9Y914 Cluster: 30S ribosomal protein S25e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S25e - Aeropyrum
pernix
Length = 103
Score = 33.9 bits (74), Expect = 2.0
Identities = 16/54 (29%), Positives = 33/54 (61%)
Frame = +3
Query: 192 EKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIY 353
E+ KEV + + +TP +++++ V+ S+ARR L L E+G++ ++ +Y
Sbjct: 36 EQARKEVARERWVTPHKLAQKMGVKVSIARRVLRILEEEGVLVLFTRNRRSPLY 89
>UniRef50_Q98RQ8 Cluster: 40S ribosomal protein S25; n=1; Guillardia
theta|Rep: 40S ribosomal protein S25 - Guillardia theta
(Cryptomonas phi)
Length = 87
Score = 33.5 bits (73), Expect = 2.7
Identities = 13/51 (25%), Positives = 31/51 (60%)
Frame = +3
Query: 147 RDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIEL 299
++K NNQ+ +K Y+K+ E+ + K ++ +S + +++ SL ++ + L
Sbjct: 15 KEKSNNQIYIEKSLYQKIIDELNKEKFVSFTSLSSKYRIKISLIKKIINHL 65
>UniRef50_Q0INA0 Cluster: Os12g0489400 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0489400 protein -
Oryza sativa subsp. japonica (Rice)
Length = 95
Score = 33.5 bits (73), Expect = 2.7
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -1
Query: 150 HELFLWTXSSSWLCRHRILPSSSVFFEAVWPKPSRPCXGGIFELESIGR 4
H LF W+ S S+ RHR LP +AVW RP +E G+
Sbjct: 47 HPLFRWSSSLSFARRHRFLPLVHSLRQAVW-SLLRPSLSSTLSVELSGK 94
>UniRef50_A2BLT6 Cluster: 30S ribosomal protein S25e; n=1;
Hyperthermus butylicus DSM 5456|Rep: 30S ribosomal
protein S25e - Hyperthermus butylicus (strain DSM 5456 /
JCM 9403)
Length = 76
Score = 33.5 bits (73), Expect = 2.7
Identities = 13/44 (29%), Positives = 30/44 (68%)
Frame = +3
Query: 189 YEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 320
Y+++ +EV + +TP +++E+ + SLAR+ L L ++G+++
Sbjct: 18 YKRIAREVKRESFVTPYMLAEKYNMTISLARQVLKRLAKEGIVE 61
>UniRef50_Q1YII8 Cluster: Possible regulatory protein; n=1;
Aurantimonas sp. SI85-9A1|Rep: Possible regulatory
protein - Aurantimonas sp. SI85-9A1
Length = 344
Score = 33.1 bits (72), Expect = 3.5
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +3
Query: 210 VPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQV 326
+P +T ++++ERL + + RRAL EL ++GL+K+V
Sbjct: 41 LPALGHLTESLLAERLGISRAPVRRALSELEQQGLVKRV 79
>UniRef50_Q1D826 Cluster: Patatin-like phospholipase family protein;
n=1; Myxococcus xanthus DK 1622|Rep: Patatin-like
phospholipase family protein - Myxococcus xanthus
(strain DK 1622)
Length = 481
Score = 32.7 bits (71), Expect = 4.6
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +3
Query: 177 DKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVV 329
D P+ L KE ++++ P E VR SLA AL++LRE+ +++ V+
Sbjct: 5 DGPSKHVLLKE--RFQITRPLEEMELRLVRASLANAALVDLREEAILRTVL 53
>UniRef50_Q7XWC1 Cluster: OSJNBb0069N01.5 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: OSJNBb0069N01.5 protein -
Oryza sativa subsp. japonica (Rice)
Length = 458
Score = 32.3 bits (70), Expect = 6.1
Identities = 16/64 (25%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = +3
Query: 189 YEKLYKEVP--QYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRA 362
+E+++ ++P Q ++I+PAV + + + AR+ +++ RE+ ++ +Q + Q I
Sbjct: 314 FEEIHDQIPDDQARIISPAVYLDHHRFKLEKARQRIVDRRERKELEATIQANRQTINKDK 373
Query: 363 TKGD 374
+K D
Sbjct: 374 SKLD 377
>UniRef50_A7ASS7 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 511
Score = 32.3 bits (70), Expect = 6.1
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 150 DKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQV 326
DK+NN +L + +KL+K VPQ T +V + V+G + R + + IK V
Sbjct: 80 DKVNN-MLSKRIFVKKLFKRVPQISDTTSILVRSKAHVKGKVGSRQDLAMGNSNKIKNV 137
>UniRef50_A1RYY6 Cluster: Small subunit ribosomal protein S25e; n=1;
Thermofilum pendens Hrk 5|Rep: Small subunit ribosomal
protein S25e - Thermofilum pendens (strain Hrk 5)
Length = 112
Score = 32.3 bits (70), Expect = 6.1
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 192 EKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATK 368
E + KE+ K +TP V++ + ++ S A++ L EL +G++ ++ IY K
Sbjct: 48 EHVIKEIRGLKYVTPYVLASKFSLKLSRAKKVLRELESRGVVVAYDKNSRVPIYVPVAK 106
>UniRef50_UPI0000DA42B8 Cluster: PREDICTED: similar to 40S ribosomal
protein S25; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S25 - Rattus norvegicus
Length = 93
Score = 31.9 bits (69), Expect = 8.1
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 294 ELREKGLIKQVVQHHGQVIYTRATKGDDPVA 386
EL +GL K V +H QV+ TR TKG D A
Sbjct: 58 ELLSEGLSKLVSKHRAQVVDTRNTKGGDAPA 88
>UniRef50_Q0DBZ5 Cluster: Os06g0504100 protein; n=3; Oryza
sativa|Rep: Os06g0504100 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 31.9 bits (69), Expect = 8.1
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 43 RTRRLRPNSLKKHRRRRKDPVAAKPRRRXGPKEK 144
R +RLR S HRRRR+ P+ PRRR P+ +
Sbjct: 149 RRQRLRLRST--HRRRRRPPLRPAPRRRRRPRPR 180
>UniRef50_P13185 Cluster: Protein kinase KIN1; n=2; Saccharomyces
cerevisiae|Rep: Protein kinase KIN1 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 1064
Score = 31.9 bits (69), Expect = 8.1
Identities = 17/61 (27%), Positives = 35/61 (57%)
Frame = +3
Query: 165 QVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQ 344
+V FD L++++ Q K+ P +S ++V L++ +++ + + +KQVV+HH
Sbjct: 341 KVPFDDENSSVLHEKIKQGKVEYPQHLS--IEVISLLSKMLVVDPKRRATLKQVVEHHWM 398
Query: 345 V 347
V
Sbjct: 399 V 399
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,779,230
Number of Sequences: 1657284
Number of extensions: 7651392
Number of successful extensions: 24299
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 23367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24236
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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