Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_A05
         (495 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X99665-1|CAA67979.1|  106|Drosophila melanogaster mitochondrial ...    77   1e-14
BT001763-1|AAN71518.1|  106|Drosophila melanogaster RH08870p pro...    77   1e-14
AE014297-3317|AAF56127.1|  106|Drosophila melanogaster CG4412-PA...    77   1e-14
BT023609-1|AAY85009.1|  159|Drosophila melanogaster IP06415p pro...    67   1e-11
AE014296-920|AAF47954.1|  147|Drosophila melanogaster CG12027-PA...    67   1e-11

>X99665-1|CAA67979.1|  106|Drosophila melanogaster mitochondrial
           ATPase couplingfactor 6 subunit protein.
          Length = 106

 Score = 77.0 bits (181), Expect = 1e-14
 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
 Frame = +3

Query: 69  SKLVGLRAATTSMMVTRNLAAAX--KATDPIQQLFLDKIREYKQXSAGGKVPDASPAVXX 242
           S L G+R   T       + A    KA+DPIQQLFLDK+REYKQ SAGGK+ D++P +  
Sbjct: 5   SLLSGMRVLRTEARRNFGIVAPALNKASDPIQQLFLDKVREYKQKSAGGKLVDSNPDIER 64

Query: 243 XXXXXXXXXXXQYGGGPGIDMTAFPSLKFEEPKLDPIDE 359
                      Q+G     DM  FP  +F + K+DPI +
Sbjct: 65  ELKTELDRVAKQFGSDGKTDMLKFPEFQFPDVKVDPITQ 103


>BT001763-1|AAN71518.1|  106|Drosophila melanogaster RH08870p
           protein.
          Length = 106

 Score = 77.0 bits (181), Expect = 1e-14
 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
 Frame = +3

Query: 69  SKLVGLRAATTSMMVTRNLAAAX--KATDPIQQLFLDKIREYKQXSAGGKVPDASPAVXX 242
           S L G+R   T       + A    KA+DPIQQLFLDK+REYKQ SAGGK+ D++P +  
Sbjct: 5   SLLSGMRVLRTEARRNFGIVAPALNKASDPIQQLFLDKVREYKQKSAGGKLVDSNPDIER 64

Query: 243 XXXXXXXXXXXQYGGGPGIDMTAFPSLKFEEPKLDPIDE 359
                      Q+G     DM  FP  +F + K+DPI +
Sbjct: 65  ELKTELDRVAKQFGSDGKTDMLKFPEFQFPDVKVDPITQ 103


>AE014297-3317|AAF56127.1|  106|Drosophila melanogaster CG4412-PA
           protein.
          Length = 106

 Score = 77.0 bits (181), Expect = 1e-14
 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
 Frame = +3

Query: 69  SKLVGLRAATTSMMVTRNLAAAX--KATDPIQQLFLDKIREYKQXSAGGKVPDASPAVXX 242
           S L G+R   T       + A    KA+DPIQQLFLDK+REYKQ SAGGK+ D++P +  
Sbjct: 5   SLLSGMRVLRTEARRNFGIVAPALNKASDPIQQLFLDKVREYKQKSAGGKLVDSNPDIER 64

Query: 243 XXXXXXXXXXXQYGGGPGIDMTAFPSLKFEEPKLDPIDE 359
                      Q+G     DM  FP  +F + K+DPI +
Sbjct: 65  ELKTELDRVAKQFGSDGKTDMLKFPEFQFPDVKVDPITQ 103


>BT023609-1|AAY85009.1|  159|Drosophila melanogaster IP06415p
           protein.
          Length = 159

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
 Frame = +3

Query: 102 SMMVTRNLA--AAXKATDPIQQLFLDKIREYKQXSAGGKVPDASPAVXXXXXXXXXXXXX 275
           S+++ R+++  A+ +  DPI Q+FLDK+REY+  S  GK  D  P               
Sbjct: 21  SLVLCRSVSNTASLRYKDPIYQIFLDKVREYRLKSPKGKPVDPGPEFEAELKEVTERLAL 80

Query: 276 QYGGGPGIDMTAFPSLKFEEPKLDPIDEQAAPK 374
           QYGGG G+DM  FP  K  +  +DPI     P+
Sbjct: 81  QYGGGEGVDMLEFPKFKLPDIDIDPISVDDLPE 113


>AE014296-920|AAF47954.1|  147|Drosophila melanogaster CG12027-PA
           protein.
          Length = 147

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
 Frame = +3

Query: 102 SMMVTRNLA--AAXKATDPIQQLFLDKIREYKQXSAGGKVPDASPAVXXXXXXXXXXXXX 275
           S+++ R+++  A+ +  DPI Q+FLDK+REY+  S  GK  D  P               
Sbjct: 9   SLVLCRSVSNTASLRYKDPIYQIFLDKVREYRLKSPKGKPVDPGPEFEAELKEVTERLAL 68

Query: 276 QYGGGPGIDMTAFPSLKFEEPKLDPIDEQAAPK 374
           QYGGG G+DM  FP  K  +  +DPI     P+
Sbjct: 69  QYGGGEGVDMLEFPKFKLPDIDIDPISVDDLPE 101


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,461,251
Number of Sequences: 53049
Number of extensions: 344037
Number of successful extensions: 494
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 494
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)