Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_P24
         (473 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         24   3.1  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    22   9.5  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    22   9.5  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 188 VTVAGSESYFLFPVLYSKSDR*LPSWQSXRSLKKKKR 78
           V+  GSE Y  F V+Y+ S + +      R L + KR
Sbjct: 270 VSARGSEEYQPFLVVYANSQQQMMKPMLQRHLTRNKR 306


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 305 ARNFTNGNICKVGF 264
           A  FT+G +CK GF
Sbjct: 88  AAGFTSGCVCKKGF 101


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 398  KKIVNQCYRIYERKK 442
            K+IV  C+R ++RK+
Sbjct: 1248 KRIVAYCHRFFDRKR 1262


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,701
Number of Sequences: 2352
Number of extensions: 8132
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)