Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_P21
(794 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 396 e-111
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 65 5e-11
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 65 6e-11
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 65 6e-11
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 29 2.9
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 29 3.8
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 29 5.1
U23513-1|ABD94110.1| 294|Caenorhabditis elegans Hypothetical pr... 29 5.1
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 28 6.7
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 28 6.7
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 28 6.7
AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical... 28 6.7
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 8.9
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 396 bits (975), Expect = e-111
Identities = 193/220 (87%), Positives = 204/220 (92%)
Frame = -1
Query: 794 DXIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPAD 615
D IFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG+MQERITTTKKGSITSVQAIYVPAD
Sbjct: 315 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERITTTKKGSITSVQAIYVPAD 374
Query: 614 DLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQ 435
DLTDPAPATTFAHLDATTVLSR IAEL IYPAVDPLDSTSRIMDPN++G HY++ARGVQ
Sbjct: 375 DLTDPAPATTFAHLDATTVLSRGIAELAIYPAVDPLDSTSRIMDPNVVGQNHYDIARGVQ 434
Query: 434 KILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLE 255
KILQDYKSLQDIIAILGMDELSEEDKLTV+RARKIQRFLSQPFQVAEVFTGH GK V LE
Sbjct: 435 KILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHQGKFVSLE 494
Query: 254 ETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKAETLAK 135
ETI+GF+ IL G+ DHLPEVAFYM G I++V KAE LAK
Sbjct: 495 ETIRGFTMILKGELDHLPEVAFYMQGGIDDVFKKAEELAK 534
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 65.3 bits (152), Expect = 5e-11
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Frame = -1
Query: 779 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK--KGSITSVQAIYVPADDLT 606
+ +A E+SA +P G+ + TD+ T+ ER K +GSIT + + +P +D+T
Sbjct: 295 YAEALREISAAREEVPGRRGFPGYMYTDLATIYERAGRVKGREGSITQIPILTMPNNDIT 354
Query: 605 DPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM----DPNIIGAEHYNVARGV 438
P P T + + + + + IYP +D L S SR+M + +H +++ +
Sbjct: 355 HPIPDLTGYITEGQIYIDKQLHKRLIYPPIDVLPSLSRLMKSAVGEGMTREDHSDLSNQL 414
Query: 437 QKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 312
K +Q + A++G++ LS +D L + K ++ F++Q
Sbjct: 415 YACYAMGKDVQAMKAVVGVEALSPDDLLYLEFLAKFEKNFIAQ 457
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 64.9 bits (151), Expect = 6e-11
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 7/163 (4%)
Frame = -1
Query: 779 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTT--KKGSITSVQAIYVPADDLT 606
+ +A EVSA +P G+ + TD+ T+ ER + GSIT + + +P DD+T
Sbjct: 283 YAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRDGSITQIPILTMPNDDIT 342
Query: 605 DPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVARGV 438
P P T + + R + IYP ++ L S SR+M I +H +V+ +
Sbjct: 343 HPIPDLTGYITEGQIYVDRQLHNRLIYPPINVLPSLSRLMKSAIGEGMTREDHSDVSNQL 402
Query: 437 QKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 312
K +Q + A++G + LS +D L + K ++ F++Q
Sbjct: 403 YACYAIGKDVQAMKAVVGEEALSSDDLLYLEFLTKFEKNFITQ 445
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 64.9 bits (151), Expect = 6e-11
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Frame = -1
Query: 794 DXIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK-------KGSITSVQ 636
D R+ +A E+S LG +P+ GY LA + + ER K +GS+T V
Sbjct: 338 DSTSRWAEALREISGRLGEMPADSGYPAYLAARLASFYERAGRVKCLGSPEREGSVTIVG 397
Query: 635 AIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM-------DPN 477
A+ P D DP + T + L + +A+ +P+++ L S S M + N
Sbjct: 398 AVSPPGGDFADPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSEYMRALEEFYEKN 457
Query: 476 IIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVA 297
E ++ ++ILQ+ + L +I+ ++G L+E DK+T+ ++ + + F
Sbjct: 458 Y--PEFVSLRTKCKEILQEEEDLSEIVQLVGKASLAESDKVTL----EVAKIIKDDFLQQ 511
Query: 296 EVFTGHAGKLVPLEETIKGFSKILAGDYD 210
+T + + P +T+ G K + G YD
Sbjct: 512 NGYTKY-DRFCPFYKTV-GMLKNMIGFYD 538
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -1
Query: 719 YQPTLATDMG--TMQERITTTKKGSITSVQ-AIYVPADDLTDPAPATTFAHLDATTV 558
Y PT T T+ TTT+ + T+V+ A +T P P TT + TTV
Sbjct: 146 YDPTATTSAAPTTIPPTTTTTRAPTTTTVRKTTQTTATTMTTPKPTTTVSTTTTTTV 202
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/112 (23%), Positives = 45/112 (40%)
Frame = -1
Query: 701 TDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYP 522
T+ T +E TTT + T+ P + T+P+P T A +TT + +E
Sbjct: 482 TEAPTTEEPTTTTTEEPTTTTTT-EEPTEAPTEPSPTTVEATEASTTPEASTSSETSTTE 540
Query: 521 AVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSE 366
+P TS + P E + DY L ++ + D++S+
Sbjct: 541 NSEPNQKTSTPVAPEASTVEEETITPIKCVDYGDYCRLWGVLQLCYRDQVSK 592
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = -1
Query: 710 TLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 531
T+AT + TTTK + T++ + T P P TT + TT +R IA
Sbjct: 173 TVATTKTSPSTLRTTTKPPTTTTIATTRITTKTTTSPPPFTT--TVTTTTSAARTIATTT 230
Query: 530 IYPAVDPLDSTSRIMDP 480
V P+ + + P
Sbjct: 231 PIKTVPPVKVFGKAIKP 247
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = -1
Query: 713 PTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAEL 534
PT T T + TTT + + P T PAP TT TT+ + A L
Sbjct: 419 PTTTTTTTTTPKPTTTTTTTTTPAPTTTQKPTTTTTTPAPTTTSTTSIPTTIATTTAAPL 478
>U23513-1|ABD94110.1| 294|Caenorhabditis elegans Hypothetical
protein D2021.4a protein.
Length = 294
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -1
Query: 497 SRIMDPNIIGAEHYN-VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRF 321
++I D N+I + HYN V+ G + L D K ++ + + D E K+ +A + +F
Sbjct: 56 NKIKDENVIFSMHYNFVSAGDPRKLIDIK-IEKVGNVYTADVYHENKKIGLAHIKTDSKF 114
Query: 320 LSQ-PF 306
L + PF
Sbjct: 115 LRKIPF 120
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 28.3 bits (60), Expect = 6.7
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 4/106 (3%)
Frame = -1
Query: 794 DXIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKK----GSITSVQAIY 627
D + + A ++S LL R P Y + + ER GS+T++ I
Sbjct: 270 DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIE 329
Query: 626 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRI 489
A D++ P + D L + G+ PA++ S SR+
Sbjct: 330 TQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRV 375
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 28.3 bits (60), Expect = 6.7
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 4/106 (3%)
Frame = -1
Query: 794 DXIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKK----GSITSVQAIY 627
D + + A ++S LL R P Y + + ER GS+T++ I
Sbjct: 262 DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIE 321
Query: 626 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRI 489
A D++ P + D L + G+ PA++ S SR+
Sbjct: 322 TQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRV 367
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 28.3 bits (60), Expect = 6.7
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 4/106 (3%)
Frame = -1
Query: 794 DXIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKK----GSITSVQAIY 627
D + + A ++S LL R P Y + + ER GS+T++ I
Sbjct: 297 DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIE 356
Query: 626 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRI 489
A D++ P + D L + G+ PA++ S SR+
Sbjct: 357 TQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRV 402
>AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical
protein Y38C1AA.11 protein.
Length = 231
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -2
Query: 550 EPLLNWVSTQLWILLTQHPVSWTPI-LLELSTTM-LHVEFRK 431
+ L N++ Q W++L HP +TP+ EL+ + L EFRK
Sbjct: 20 QTLHNYIGEQ-WLMLFSHPADFTPVCTTELAELVKLAPEFRK 60
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = -1
Query: 758 VSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFA 579
VS+ ++P QPT+++++G + + T K+ +I V+ P+ P T
Sbjct: 1332 VSSFAPKVPETKINQPTISSNIGDLSK---TEKESTIPRVEV--TPS---ASPESTTVTE 1383
Query: 578 HLDATTVLSRAIAELGIYPA 519
H+DA T S I +G P+
Sbjct: 1384 HIDAET-NSATIPTIGTPPS 1402
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,340,132
Number of Sequences: 27780
Number of extensions: 402538
Number of successful extensions: 1061
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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