Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_P14
(684 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0319 - 16712572-16712654,16712756-16712797,16713955-167142... 198 4e-51
03_01_0276 + 2124538-2124550,2124678-2124962,2126813-2126854,212... 198 4e-51
02_05_1201 + 34929577-34929589,34930252-34930587,34931378-349314... 190 9e-49
12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845 49 3e-06
05_07_0365 - 29662703-29662710,29664321-29664378,29664675-296647... 30 2.0
07_03_1151 + 24385272-24386543 29 2.6
04_04_1586 - 34621945-34623366 29 2.6
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 29 4.5
03_06_0296 + 32901696-32901892,32901989-32902232,32903992-329041... 29 4.5
11_06_0538 + 24759030-24759379,24759380-24759488,24759604-247596... 28 6.0
08_02_1367 + 26432425-26432622,26434071-26434162,26434337-264344... 28 6.0
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 28 6.0
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 28 6.0
06_03_0025 - 15577231-15577420,15577682-15577813,15578025-155781... 28 7.9
03_01_0084 + 676538-676669,677828-677959,678085-678210,678820-67... 28 7.9
>10_08_0319 -
16712572-16712654,16712756-16712797,16713955-16714239,
16714346-16714358
Length = 140
Score = 198 bits (482), Expect = 4e-51
Identities = 89/114 (78%), Positives = 106/114 (92%)
Frame = -2
Query: 530 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDM 351
MSKRGRGGSAG KFR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 350 IVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNXQGRNEG 189
++ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN +G +G
Sbjct: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKG 114
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = -3
Query: 205 KGEMKGSAITGPVAKECADLWPR 137
KGEMKGSAITGP+ KECADLWPR
Sbjct: 109 KGEMKGSAITGPIGKECADLWPR 131
>03_01_0276 +
2124538-2124550,2124678-2124962,2126813-2126854,
2126943-2127025
Length = 140
Score = 198 bits (482), Expect = 4e-51
Identities = 89/114 (78%), Positives = 106/114 (92%)
Frame = -2
Query: 530 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDM 351
MSKRGRGGSAG KFR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 350 IVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNXQGRNEG 189
++ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN +G +G
Sbjct: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKG 114
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = -3
Query: 205 KGEMKGSAITGPVAKECADLWPR 137
KGEMKGSAITGP+ KECADLWPR
Sbjct: 109 KGEMKGSAITGPIGKECADLWPR 131
>02_05_1201 +
34929577-34929589,34930252-34930587,34931378-34931419,
34931630-34931712
Length = 157
Score = 190 bits (463), Expect = 9e-49
Identities = 85/110 (77%), Positives = 102/110 (92%)
Frame = -2
Query: 518 GRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVAT 339
GRGGSAG KFR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM++AT
Sbjct: 22 GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT 81
Query: 338 VKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNXQGRNEG 189
VKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN +G +G
Sbjct: 82 VKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKG 131
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = -3
Query: 205 KGEMKGSAITGPVAKECADLWPR 137
KGEMKGSAITGP+ KECADLWPR
Sbjct: 126 KGEMKGSAITGPIGKECADLWPR 148
>12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845
Length = 170
Score = 49.2 bits (112), Expect = 3e-06
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = -2
Query: 455 INCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKK---VMPAVVI 285
+ DN+GAK V+ +Q ++G+ A GD I+ +VK+ +P + K V+ VV+
Sbjct: 58 LKVVDNSGAKR--VMCIQSLRGK----KGARLGDTIIGSVKEAQPRGKVKKGDVVYGVVV 111
Query: 284 RQRKPFRRRDGVFIYFEDNAGVIVNXQG 201
R R DG I F+DNA V+VN +G
Sbjct: 112 RAAMKRGRNDGSEIQFDDNAIVLVNNKG 139
>05_07_0365 -
29662703-29662710,29664321-29664378,29664675-29664732,
29665029-29665086,29665737-29665794,29666091-29666134,
29666445-29666502,29666799-29666981,29667154-29667211,
29667508-29667565,29667862-29667919,29668216-29668259,
29668570-29668627,29668924-29669106,29669279-29669336,
29669633-29669676,29669987-29670044,29670341-29670398,
29670696-29670753,29671050-29671052
Length = 420
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 475 PREIRNFA-PAEPPRPLLDILLYQNFERNNR 564
P +IR FA P P+L IL Y F RNNR
Sbjct: 383 PSDIRCFAEPTAASWPMLWILRYSTFRRNNR 413
>07_03_1151 + 24385272-24386543
Length = 423
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 430 APVLSAQLITAPTGRPREIRNFAPAEPPRPLLDILLYQNFERNNRDVKL 576
AP + P R R +R APA P P +LL FE+ DV L
Sbjct: 147 APAAVTVIAAPPRRRRRSMRVAAPAPAPAPPRPVLL-GGFEKEQEDVAL 194
>04_04_1586 - 34621945-34623366
Length = 473
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -2
Query: 530 MSKRGRGGSAGAKFRISLGLPVGAV-INCADNTGAKNLYVIAVQGIKGRLNRLPAAGS 360
++ RG GG+ + +PVGAV + N A + Y + + GI RLP S
Sbjct: 282 LASRGAGGAGSLVLGRTEAVPVGAVWVPLVRNNQASSFYYVGLTGIGVGGERLPLQDS 339
>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = -2
Query: 377 LPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNXQGR 198
+P +G G +++ KPEL+ P+ I+Q PFR +++ A V + Q
Sbjct: 4656 MPNSGDGSRLLSN---SKPELQTDTPPSQ-IKQTNPFRSIGDAMADWKERAKVSADTQDH 4711
Query: 197 NEGLGHH 177
HH
Sbjct: 4712 QPEAEHH 4718
>03_06_0296 +
32901696-32901892,32901989-32902232,32903992-32904112,
32904219-32904406
Length = 249
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 219 DTRIVLKVYKYSITPSERFPLPDDHCRHYLFPEFRFTLFDCGHNHV 356
+ I+++ Y+ T +R P P D + +F F L+DC +N V
Sbjct: 101 EINIIIEAYR---TLRDRGPYPADQVVRDINGKFAFVLYDCSNNSV 143
>11_06_0538 +
24759030-24759379,24759380-24759488,24759604-24759692,
24760179-24760287,24760370-24760471,24760564-24760628,
24760830-24760936,24761023-24761087,24761163-24761217,
24761305-24761465
Length = 403
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +1
Query: 199 RPXLLTMTPALSSKY-INTPSRLLNGFRCLMTT--AGITFFRSSGLPFLTVATIMSPEPA 369
R LLT P + + SRL R L AG+ FF S+ + + I+ P P+
Sbjct: 34 RGFLLTQRPCVEGTMTMGEQSRLPESLRLLDAAFDAGVNFFDSAEMYYYAPLLILPPPPS 93
Query: 370 AGSLFR 387
+ LF+
Sbjct: 94 SFPLFQ 99
>08_02_1367 +
26432425-26432622,26434071-26434162,26434337-26434403,
26434519-26434638,26434792-26435023,26435525-26435606,
26435985-26436117,26436332-26436537,26436633-26436758,
26437208-26437907
Length = 651
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 318 FRFTLFDCGHNHVPGTGRRQSVQATFDTLDSDHIQILCPCVVGAVDYCSHW 470
FRF + D H+ GT + + ++ T+D H L + Y S+W
Sbjct: 455 FRFCIADSEHDWREGTDQYKFIEQCLSTVDRKHQPWLIFAAHRVLGYSSNW 505
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 430 APVLSAQLITAPTGRPREIRNFAPAEPPRP 519
AP S+ L TAP P + + FAP PP P
Sbjct: 328 APNASSSLFTAPV--PADRQQFAPPPPPSP 355
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = -2
Query: 509 GSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAG 363
GSA A + L A + +TG GI G L+RLPA G
Sbjct: 327 GSAAAIMSATALLQKAAELGATTSTGCYGGVAFPAMGIAGGLDRLPAIG 375
>06_03_0025 -
15577231-15577420,15577682-15577813,15578025-15578173,
15579012-15579071,15593208-15593297,15593604-15593871,
15594517-15594608,15595355-15595441,15597333-15597440,
15597709-15597822,15598253-15598420,15599442-15599579,
15599699-15599908,15600986-15601237,15601965-15602111,
15603327-15603443
Length = 773
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 264 SERFPLPDDHCRHYLFPEFRFTLFDCGHNHVPGTGRRQS 380
S R PLP+D C Y+ ++R + H+ G R S
Sbjct: 25 SSRVPLPEDTCDSYVEQKYRCYIRTLKGCHISGRNRLDS 63
>03_01_0084 +
676538-676669,677828-677959,678085-678210,678820-678882,
678964-679061,679133-679340,679859-679930,680016-680108,
680297-680398,680568-680665,681059-681140,681274-681362,
681960-682065,682145-682210,682527-682633,682907-683027,
683226-683411,683490-683789,683887-683967,684061-684225,
684297-684383,684476-684601,684750-684830,684917-684988,
685353-685364
Length = 934
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 430 APVLSAQ-LITAPTGRPREIRNFAPAEPPRPLLDILLYQNFERNNRDVKLVTFVVQF 597
AP+LS Q LI P+ E+ + PPR + I L R +RDV ++ F F
Sbjct: 778 APLLSVQALILPPSHLKTELSSVPDTIPPRAQVQIPLEVVNLRASRDVAVLDFSYTF 834
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,344,005
Number of Sequences: 37544
Number of extensions: 415505
Number of successful extensions: 1373
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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