Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_P13
         (338 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113572-1|AAM29577.1|   90|Drosophila melanogaster RH19679p pro...    51   3e-07
AE014296-2905|AAF49346.2|   90|Drosophila melanogaster CG7630-PA...    51   3e-07
AY089218-1|AAL89956.1|  305|Drosophila melanogaster AT01821p pro...    28   2.7  
AF045470-1|AAF18568.1|  305|Drosophila melanogaster Gom protein.       28   2.7  
AE013599-3345|AAF46808.2|  305|Drosophila melanogaster CG6727-PA...    28   2.7  
AY113238-1|AAM29243.1| 1566|Drosophila melanogaster AT11515p pro...    27   8.2  
AE014134-2480|AAF53382.2| 1566|Drosophila melanogaster CG15287-P...    27   8.2  

>AY113572-1|AAM29577.1|   90|Drosophila melanogaster RH19679p
           protein.
          Length = 90

 Score = 51.2 bits (117), Expect = 3e-07
 Identities = 22/60 (36%), Positives = 32/60 (53%)
 Frame = -3

Query: 180 YHGESHFKPPTMDELPVPKGSWQSHHDANQRRFNAVLLFGIXXXXXXXXXAKTSGLVYLN 1
           YHG  H    TM++LPVP G W+  H     ++NA L+ GI          K+SG+++ N
Sbjct: 24  YHG-GHGPHSTMNDLPVPAGDWKEQHSQKNAKYNAALITGILVLAGTIGFVKSSGIIHFN 82


>AE014296-2905|AAF49346.2|   90|Drosophila melanogaster CG7630-PA
           protein.
          Length = 90

 Score = 51.2 bits (117), Expect = 3e-07
 Identities = 22/60 (36%), Positives = 32/60 (53%)
 Frame = -3

Query: 180 YHGESHFKPPTMDELPVPKGSWQSHHDANQRRFNAVLLFGIXXXXXXXXXAKTSGLVYLN 1
           YHG  H    TM++LPVP G W+  H     ++NA L+ GI          K+SG+++ N
Sbjct: 24  YHG-GHGPHSTMNDLPVPAGDWKEQHSQKNAKYNAALITGILVLAGTIGFVKSSGIIHFN 82


>AY089218-1|AAL89956.1|  305|Drosophila melanogaster AT01821p
           protein.
          Length = 305

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -3

Query: 147 MDELPVPKGSWQSHHDANQRRFNAVLLFGIXXXXXXXXXAKTSGLVYLN 1
           + + P P+G +     A   R+N +L+ GI         A +SG++ LN
Sbjct: 83  LSDCPKPEGDFMKAWSAKNSRYNLILVSGILAAGGTLGFALSSGVLCLN 131


>AF045470-1|AAF18568.1|  305|Drosophila melanogaster Gom protein.
          Length = 305

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -3

Query: 147 MDELPVPKGSWQSHHDANQRRFNAVLLFGIXXXXXXXXXAKTSGLVYLN 1
           + + P P+G +     A   R+N +L+ GI         A +SG++ LN
Sbjct: 83  LSDCPKPEGDFMKAWSAKNSRYNLILVSGILAAGGTLGFALSSGVLCLN 131


>AE013599-3345|AAF46808.2|  305|Drosophila melanogaster CG6727-PA
           protein.
          Length = 305

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -3

Query: 147 MDELPVPKGSWQSHHDANQRRFNAVLLFGIXXXXXXXXXAKTSGLVYLN 1
           + + P P+G +     A   R+N +L+ GI         A +SG++ LN
Sbjct: 83  LSDCPKPEGDFMKAWSAKNSRYNLILVSGILAAGGTLGFALSSGVLCLN 131


>AY113238-1|AAM29243.1| 1566|Drosophila melanogaster AT11515p protein.
          Length = 1566

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 132  VPKGSWQSHHDANQRR 85
            + K SW++HH+ N+RR
Sbjct: 1464 ISKRSWKNHHEENRRR 1479


>AE014134-2480|AAF53382.2| 1566|Drosophila melanogaster CG15287-PA
            protein.
          Length = 1566

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 132  VPKGSWQSHHDANQRR 85
            + K SW++HH+ N+RR
Sbjct: 1464 ISKRSWKNHHEENRRR 1479


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,011,988
Number of Sequences: 53049
Number of extensions: 298640
Number of successful extensions: 693
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 777358641
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)