Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_P10
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023828-10|CAA19447.1| 247|Caenorhabditis elegans Hypothetical... 262 2e-70
U23081-1|AAA79846.1| 247|Caenorhabditis elegans triosephosphate... 260 1e-69
Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ... 30 1.9
U13645-6|AAV34802.1| 457|Caenorhabditis elegans Hypothetical pr... 29 4.5
U13645-5|AAM15541.1| 425|Caenorhabditis elegans Hypothetical pr... 29 4.5
U13645-4|AAA20986.2| 529|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical... 28 5.9
Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical pr... 28 7.8
>AL023828-10|CAA19447.1| 247|Caenorhabditis elegans Hypothetical
protein Y17G7B.7 protein.
Length = 247
Score = 262 bits (642), Expect = 2e-70
Identities = 125/181 (69%), Positives = 149/181 (82%)
Frame = -1
Query: 726 WKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHALESGLKVIAC 547
+K PKGAFTGEISPAMIKD+G+ WVILGHSERR +FGE D L+AEK HALE+G+KV+ C
Sbjct: 66 YKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVVFC 125
Query: 546 IGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQAQDVH 367
IGE LEERE+G T++V FRQL+A+V G WENIV+AYEPVWAIGTGKTA+ +QAQ+VH
Sbjct: 126 IGEKLEEREAGHTKDVNFRQLQAIVDK-GVSWENIVIAYEPVWAIGTGKTASGEQAQEVH 184
Query: 366 HALRNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFLVGGASLKPEFVEIVN 187
+R +L VS +V+DA RI YGGSVTA NA EL DIDGFLVGGASLKP+FV+I+N
Sbjct: 185 EWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLVGGASLKPDFVKIIN 244
Query: 186 A 184
A
Sbjct: 245 A 245
>U23081-1|AAA79846.1| 247|Caenorhabditis elegans triosephosphate
isomerase protein.
Length = 247
Score = 260 bits (636), Expect = 1e-69
Identities = 123/181 (67%), Positives = 149/181 (82%)
Frame = -1
Query: 726 WKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHALESGLKVIAC 547
+K PKGAFTGEISPAMIKD+G+ WVILGHSERR +FGE D L+AEK HALE+G+KV+ C
Sbjct: 66 YKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVVFC 125
Query: 546 IGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQAQDVH 367
IGE LEERE+G T++V FRQL+A+V G WENIV+AYEPVWAIGTGKTA+ +QAQ+VH
Sbjct: 126 IGEKLEEREAGHTKDVNFRQLQAIVDK-GVSWENIVIAYEPVWAIGTGKTASGEQAQEVH 184
Query: 366 HALRNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFLVGGASLKPEFVEIVN 187
+R +L VS +V+DA RI YGGSVTA NA ++ DIDGFLVGGASLKP+FV+I+N
Sbjct: 185 EWIRAFLKEKVSPAVADATRIIYGGSVTADNAADVGKKPDIDGFLVGGASLKPDFVKIIN 244
Query: 186 A 184
A
Sbjct: 245 A 245
>Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical
protein F35G12.4b protein.
Length = 680
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = -1
Query: 450 ENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSD--AVRIQYGGSVTAA 277
EN Y P W + K+ Q D AL +WLS+ +G + ++ YGG + +
Sbjct: 440 ENSRQVYIPSWFVVDSKSGMLQITLDELDALSSWLSSKDAGFDDNDRETKLNYGGMMLRS 499
Query: 276 NAKELASCK 250
+ CK
Sbjct: 500 LFERWPPCK 508
>Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical
protein F35G12.4a protein.
Length = 683
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = -1
Query: 450 ENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSD--AVRIQYGGSVTAA 277
EN Y P W + K+ Q D AL +WLS+ +G + ++ YGG + +
Sbjct: 440 ENSRQVYIPSWFVVDSKSGMLQITLDELDALSSWLSSKDAGFDDNDRETKLNYGGMMLRS 499
Query: 276 NAKELASCK 250
+ CK
Sbjct: 500 LFERWPPCK 508
>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
protein R10F2.1 protein.
Length = 2779
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = -1
Query: 423 VWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDAVRIQYGGS 289
V+++ TG+ T AQ HH + ++++VS S SDA+R+ G S
Sbjct: 2612 VYSVKTGEIRTLSDAQHHHHHPTHSMTSSVSTS-SDALRMVRGSS 2655
>U13645-6|AAV34802.1| 457|Caenorhabditis elegans Hypothetical
protein C05D10.1c protein.
Length = 457
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 301 LNTYSVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 420
+++ +V TPT G T+SMVD+L L ++ T SP
Sbjct: 191 MHSSTVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 230
>U13645-5|AAM15541.1| 425|Caenorhabditis elegans Hypothetical
protein C05D10.1b protein.
Length = 425
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 301 LNTYSVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 420
+++ +V TPT G T+SMVD+L L ++ T SP
Sbjct: 159 MHSSTVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 198
>U13645-4|AAA20986.2| 529|Caenorhabditis elegans Hypothetical
protein C05D10.1a protein.
Length = 529
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 301 LNTYSVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 420
+++ +V TPT G T+SMVD+L L ++ T SP
Sbjct: 263 MHSSTVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 302
>AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical
protein K07H8.1 protein.
Length = 493
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -2
Query: 533 SKRENLARLRKLFLDN*KL*YRPLVTNGK-ILCLPMNLYGLLV 408
+K+ N+ +L + LDN + + P + + ILC +NLYG L+
Sbjct: 112 AKQSNIEKLINIVLDNRSVGFPPSSDSPQFILCRELNLYGNLL 154
>Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical
protein F54F12.1 protein.
Length = 1217
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = -1
Query: 522 ESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLS 343
+S ++ + + LKAL IG + L+Y+ + + +GK + Q V+H NW+
Sbjct: 181 QSIQSSQSLLPVLKALRKVIGSHVNGLELSYKYIAGLPSGKLDLEELIQAVYH---NWIK 237
Query: 342 ANV 334
+
Sbjct: 238 NRI 240
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,325,192
Number of Sequences: 27780
Number of extensions: 358010
Number of successful extensions: 1030
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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