Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_P09
         (735 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    26   0.36 
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   5.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   5.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   5.9  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.8  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 241 YAYYKTIPHKCHFNLET 191
           Y  Y  +PH+CH NL++
Sbjct: 339 YTMYFRMPHRCHGNLQS 355


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -2

Query: 581 VKFAVTLWMLILRYTFDWFYQNFYV 507
           +  A+ L  + L++TF W + + +V
Sbjct: 210 IVMALVLQFITLQHTFIWVFNDVFV 234


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -2

Query: 581 VKFAVTLWMLILRYTFDWFYQNFYV 507
           +  A+ L  + L++TF W + + +V
Sbjct: 210 IVMALVLQFITLQHTFIWVFNDVFV 234


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -2

Query: 581 VKFAVTLWMLILRYTFDWFYQNFYV 507
           +  A+ L  + L++TF W + + +V
Sbjct: 210 IVMALVLQFITLQHTFIWVFNDVFV 234


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 241 YAYYKTIPHKCHFN 200
           Y  Y  +PHKC+ N
Sbjct: 331 YTLYFRMPHKCNGN 344


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 241 YAYYKTIPHKCHFN 200
           Y  Y  +PHKC+ N
Sbjct: 338 YTLYFRMPHKCNGN 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,499
Number of Sequences: 336
Number of extensions: 3877
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)