Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_P07
(683 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 37 0.003
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 37 0.003
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 37 0.003
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 36 0.004
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 35 0.010
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 35 0.013
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 35 0.013
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 34 0.022
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 33 0.051
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 31 0.12
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 31 0.12
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 31 0.12
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 31 0.16
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 31 0.20
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 31 0.20
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 31 0.20
SPCC16C4.08c |skb15||Shk1 kinase binding protein 15|Schizosaccha... 31 0.20
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 30 0.27
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 30 0.36
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 29 0.47
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 29 0.63
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 29 0.63
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 27 1.9
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 27 1.9
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 27 1.9
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 27 2.5
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 27 2.5
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 27 2.5
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 4.4
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 26 4.4
SPBC1677.03c |||threonine ammonia-lyase|Schizosaccharomyces pomb... 26 4.4
SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizos... 26 5.8
SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr... 26 5.8
SPCC1450.10c |||iron hydrogenase large subunit |Schizosaccharomy... 26 5.8
SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyc... 26 5.8
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 25 7.7
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 25 7.7
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 36.7 bits (81), Expect = 0.003
Identities = 21/74 (28%), Positives = 29/74 (39%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSN 504
LS DG +WS +T V GH G + S D +A+LWDV +
Sbjct: 419 LSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAA 478
Query: 503 CLDNIVEGHGQINC 462
L V ++C
Sbjct: 479 PLRVFVGHQNDVDC 492
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 36.7 bits (81), Expect = 0.003
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = -1
Query: 284 VGQSIIIGCNNGKVVQLNLQDGNLISELYESASPVLSLTILANQMFAIGRQDGTCTVISL 105
V +I GC +G ++ + + + Y+ +SP+LSL + +G DGT T + L
Sbjct: 24 VKNELIAGCWDGSLLHYQISENPELLGKYDLSSPILSLEYTDEKTALVGNLDGTVTTLDL 83
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 36.7 bits (81), Expect = 0.003
Identities = 17/69 (24%), Positives = 28/69 (40%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSN 504
L+ +D +C +W G + + GHT G + S +G LWD+G
Sbjct: 479 LTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGR 538
Query: 503 CLDNIVEGH 477
+ + GH
Sbjct: 539 RI-KTMRGH 546
Score = 33.9 bits (74), Expect = 0.022
Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSN 504
LS D S +WS +T V GHT G + S D +A+LW
Sbjct: 395 LSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIY 454
Query: 503 CLDNIVEGH-GQINCCT 456
L + GH ++C T
Sbjct: 455 PL-RVFAGHLSDVDCVT 470
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = -1
Query: 680 SAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSN 504
SA ++G +W TG GH +VS D + + WDV K+N
Sbjct: 522 SADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDVFKTN 580
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 36.3 bits (80), Expect = 0.004
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSN 504
LSA D + +W E G GHT +VS SRD + K+W++ N
Sbjct: 79 LSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNI-IGN 137
Query: 503 CLDNIVE-GHGQ-INCCTITTTTDEV 432
C I + GH ++C + D +
Sbjct: 138 CKYTITDGGHSDWVSCVRFSPNPDNL 163
Score = 35.5 bits (78), Expect = 0.007
Identities = 23/73 (31%), Positives = 31/73 (42%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSN 504
+SAG D + +W ET GHT G S RDG+ LWD+ +S
Sbjct: 166 VSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNEST 225
Query: 503 CLDNIVEGHGQIN 465
L ++ E IN
Sbjct: 226 HLYSL-EAKANIN 237
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 35.1 bits (77), Expect = 0.010
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = -1
Query: 680 SAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSNC 501
S D + IW+ +T GHT +G +VS + DG K+W + C
Sbjct: 524 SGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGEC 583
Query: 500 L 498
+
Sbjct: 584 V 584
Score = 31.9 bits (69), Expect = 0.089
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = -1
Query: 680 SAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSNC 501
SA D + +W + TG + GH + S S D + ++W+V C
Sbjct: 482 SASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQC 541
Query: 500 LDNIVEGH 477
+ + EGH
Sbjct: 542 VQTL-EGH 548
Score = 31.5 bits (68), Expect = 0.12
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -1
Query: 683 LSAGADGS-CXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKS 507
L++GAD S +W + + + GH+ G ++S SRD + ++W++ K
Sbjct: 162 LASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKR 221
Query: 506 NCLDNIVEGH 477
+ + I H
Sbjct: 222 SAVRTIPVFH 231
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 34.7 bits (76), Expect = 0.013
Identities = 21/95 (22%), Positives = 34/95 (35%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSN 504
+SA DG+ +W A TG+ + GH +S D ++W++
Sbjct: 591 VSASYDGTLRVWKASTGVCLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLESGE 650
Query: 503 CLDNIVEGHGQINCCTITTTTDEVKVENEREIGTS 399
L + HG N + T + V TS
Sbjct: 651 LLQTL---HGHSNLVSQVTFNQNILVSASAPPDTS 682
Score = 32.7 bits (71), Expect = 0.051
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = -1
Query: 569 GXNIVSVSRDGSAKLWDVGKSNCLDNIVEGH-GQINCCTITTTTDEVKVENEREIGTSNK 393
G IVS S DG+ ++W CL +++ GH G++ TI + + GT K
Sbjct: 587 GDLIVSASYDGTLRVWKASTGVCL-HVLRGHVGRVYSVTINPSRQQC-----ISAGTDAK 640
Query: 392 LLILGFESGLIM 357
+ I ESG ++
Sbjct: 641 IRIWNLESGELL 652
Score = 31.9 bits (69), Expect = 0.089
Identities = 17/63 (26%), Positives = 25/63 (39%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSN 504
+SAG D IW+ E+G GH+ S D S ++WD+ +
Sbjct: 633 ISAGTDAKIRIWNLESGELLQTLHGHSNLVSQVTFNQNILVSASAPPDTSLRVWDLNTGS 692
Query: 503 CLD 495
C D
Sbjct: 693 CRD 695
Score = 31.1 bits (67), Expect = 0.16
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Frame = -1
Query: 569 GXNIVSVSRDGSAKLWDVGKSNCLDNIVEGH-GQINCCTI------TTTTDEVKVENERE 411
G +V+ S D + ++WD+ C + GH I C I TT TD+V+ EN
Sbjct: 456 GDTLVTGSTDRTVRVWDLRTGEC-KQVFYGHTSTIRCIKIVQGNQSTTDTDDVEKENRPA 514
Query: 410 IGTSNKL 390
+N +
Sbjct: 515 SNDANSM 521
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 34.7 bits (76), Expect = 0.013
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSN 504
+S D + IW+ + G + H+ G + S DG A++WDV
Sbjct: 154 VSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQ 213
Query: 503 CLDNIVE 483
CL +VE
Sbjct: 214 CLKTLVE 220
Score = 29.9 bits (64), Expect = 0.36
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = -1
Query: 680 SAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSNC 501
SA D + IW E + GHT G +VS S D + ++W++ C
Sbjct: 113 SASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTC 172
Query: 500 L 498
L
Sbjct: 173 L 173
Score = 26.6 bits (56), Expect = 3.3
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -1
Query: 284 VGQSIIIGCNNGKVVQLNLQDGNLISELYESASPVLSLTILAN-QMFAIGRQDGTCTVIS 108
+G ++ G + V NLQDG + L + P++S++I A+ + A DG +
Sbjct: 149 LGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWD 208
Query: 107 LL 102
+L
Sbjct: 209 VL 210
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 33.9 bits (74), Expect = 0.022
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDV 516
++ DG +W +G V HT RG + S S DGS + WD+
Sbjct: 355 ITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDL 410
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 32.7 bits (71), Expect = 0.051
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSN 504
LS D + IWS ET N L + S S DG+ K WD+ K
Sbjct: 408 LSGSDDSTIKIWSLET--NTCLHTFSAHIGPVQSLALADSRLFSCSLDGTIKQWDIEKKK 465
Query: 503 CLDNIVEGH 477
C+ + GH
Sbjct: 466 CVHTLF-GH 473
Score = 29.9 bits (64), Expect = 0.36
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = -1
Query: 680 SAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSNC 501
S D + +W+ T L GH+ ++S S D + ++W+ S C
Sbjct: 288 SGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQ--CKLISGSMDKTIRIWNYRTSEC 345
Query: 500 LDNIVEGH-GQINCCTITTT 444
+ +I+ GH + C T +T
Sbjct: 346 I-SILHGHTDSVLCLTFDST 364
Score = 25.8 bits (54), Expect = 5.8
Identities = 15/62 (24%), Positives = 25/62 (40%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSN 504
+S AD + +W G + GHT ++S S D + K+W + +
Sbjct: 367 VSGSADCTVKLWHFSGG-KRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNT 425
Query: 503 CL 498
CL
Sbjct: 426 CL 427
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 31.5 bits (68), Expect = 0.12
Identities = 26/101 (25%), Positives = 36/101 (35%), Gaps = 1/101 (0%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPV-LXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKS 507
LS D IW + + GH G + +S S D + KLWD
Sbjct: 283 LSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDGRSFLSTSFDKTIKLWDTELG 342
Query: 506 NCLDNIVEGHGQINCCTITTTTDEVKVENEREIGTSNKLLI 384
CL N NC D+ NE GT++K ++
Sbjct: 343 KCL-NCFNSDRLTNCVKFQVDPDK---PNEFLAGTADKRIL 379
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 31.5 bits (68), Expect = 0.12
Identities = 17/57 (29%), Positives = 22/57 (38%)
Frame = -1
Query: 668 DGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSNCL 498
D +W T + GH G IVS S D +A+LWDV C+
Sbjct: 381 DRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCI 437
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/56 (26%), Positives = 21/56 (37%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDV 516
LS D S W +TG + + GH G S S D A++W +
Sbjct: 554 LSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSI 609
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 31.5 bits (68), Expect = 0.12
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDV--GK 510
+SA D + +W TG+ ++ GH+ G + S D ++WD+ GK
Sbjct: 281 VSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGK 340
Query: 509 S 507
S
Sbjct: 341 S 341
Score = 29.1 bits (62), Expect = 0.63
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = -1
Query: 680 SAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDV 516
+ AD + +W A + GH G +VS S D + +LWDV
Sbjct: 240 TGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDV 294
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 31.1 bits (67), Expect = 0.16
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLW 522
++AG D +W +T + GHT + I+S S DG+ K+W
Sbjct: 202 ITAGDDNLIKVWDYQTKACVRILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIW 255
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 30.7 bits (66), Expect = 0.20
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -1
Query: 560 IVSVSRDGSAKLWDVGKSNCLDNIVEGHGQI 468
++SV +D KLWD+ +C++ V+ G+I
Sbjct: 188 LLSVGKDSFMKLWDLSIQHCVETHVDHQGEI 218
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 30.7 bits (66), Expect = 0.20
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -1
Query: 260 CNNGKVVQLNLQDGNLISELYESASPVLSLTILANQ 153
C+N V++L DG + EL+ S V SLT + NQ
Sbjct: 192 CSNDGVIKLWTSDGEFLYELHGHTSFVYSLTYIHNQ 227
Score = 26.6 bits (56), Expect = 3.3
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 8/93 (8%)
Frame = -1
Query: 560 IVSVSRDGSAKLWDVGKSNCLDNIVEGH-GQINCCTITTTTD------EVKVENEREIGT 402
I S SRDG+ +W+ + E H G +NC D + K +E+GT
Sbjct: 28 IGSASRDGTYSVWEQINGEWTPHFYENHEGFVNCVCYVPAIDKNSRGGQDKCGILQEVGT 87
Query: 401 -SNKLLILGFESGLIMCAHIAKRQELFTKQIDS 306
S + G ES I A + + T DS
Sbjct: 88 NSPSYYLFGHESN-ICSASALNSETIITGSWDS 119
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 30.7 bits (66), Expect = 0.20
Identities = 15/65 (23%), Positives = 26/65 (40%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSN 504
++AG D +W T N + GH + +V+ S D + +LWD+
Sbjct: 263 VTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGK 322
Query: 503 CLDNI 489
L +
Sbjct: 323 TLTTL 327
Score = 26.2 bits (55), Expect = 4.4
Identities = 15/68 (22%), Positives = 25/68 (36%)
Frame = -1
Query: 680 SAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSNC 501
+ D + IW +G+ + GH R + S D K WD+ ++N
Sbjct: 180 TGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDL-ETNK 238
Query: 500 LDNIVEGH 477
+ GH
Sbjct: 239 VIRHYHGH 246
>SPCC16C4.08c |skb15||Shk1 kinase binding protein
15|Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 30.7 bits (66), Expect = 0.20
Identities = 17/70 (24%), Positives = 30/70 (42%)
Frame = -1
Query: 329 LFTKQIDSACNACIVVGQSIIIGCNNGKVVQLNLQDGNLISELYESASPVLSLTILANQM 150
LF+ S NA + +I+G +NG V+ L+ DG ++ E V S+ + + +
Sbjct: 193 LFSFSSKSQLNALCLYQSKLIVGRDNGTVLVLDTSDGKILHEFTAHKKRVKSVYPVDDYL 252
Query: 149 FAIGRQDGTC 120
C
Sbjct: 253 ITASSDGSVC 262
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 30.3 bits (65), Expect = 0.27
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -1
Query: 680 SAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSNC 501
S D + IW+ + GHT + I S S D + ++WD C
Sbjct: 244 SGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNW-IYSSSYDKTIRIWDAKDGKC 302
Query: 500 LDNIVEGH-GQINCCTITT 447
L +I++GH ++N +++T
Sbjct: 303 L-HILKGHAARVNHLSLST 320
Score = 29.5 bits (63), Expect = 0.47
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXX-GHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKS 507
+SA D +W + P+ GH G I + S D S +LWD GK+
Sbjct: 362 VSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWD-GKT 420
Query: 506 NCLDNIVEGH 477
+ GH
Sbjct: 421 GKFLATLRGH 430
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 29.9 bits (64), Expect = 0.36
Identities = 16/69 (23%), Positives = 25/69 (36%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSN 504
++A DGS +W+ + GH + S S+D K WD
Sbjct: 180 VTASDDGSLKVWNFHMSTEELKLTGHGWDVKTVDWHPSKGLLASGSKDNLVKFWDPRTGT 239
Query: 503 CLDNIVEGH 477
C+ + GH
Sbjct: 240 CIATL-HGH 247
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 29.5 bits (63), Expect = 0.47
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1
Query: 560 IVSVSRDGSAKLWDVGKSNCLDNIVEGHGQINC 462
+VS S D + KLWD+ NC+ + +++C
Sbjct: 270 LVSGSADTTLKLWDLSTCNCVKSFTYHSDKVSC 302
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 29.1 bits (62), Expect = 0.63
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -1
Query: 680 SAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWD 519
S+ AD + +W E G+ V M D G +V+ SRD ++WD
Sbjct: 152 SSSADNTIKLWDCEKGVAHVSLKMDVMCQSMSFNAD-GTRLVTTSRDKKVRVWD 204
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 29.1 bits (62), Expect = 0.63
Identities = 20/89 (22%), Positives = 32/89 (35%)
Frame = -1
Query: 680 SAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSNC 501
SAGADG ++ +TG H V+ S S K+WD +
Sbjct: 206 SAGADGKVYVFDGKTGDQVYEIDAHKGSIFSISWSPDSSQFVTSSAGYSCKIWDANTGSL 265
Query: 500 LDNIVEGHGQINCCTITTTTDEVKVENER 414
+ + + T+ T D + V N +
Sbjct: 266 IREWLSSDKKQLVGTVWPTKDLIIVVNSK 294
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 27.5 bits (58), Expect = 1.9
Identities = 16/73 (21%), Positives = 27/73 (36%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSN 504
+S D S +W TG + GH ++S S D + ++WD+
Sbjct: 563 ISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQN--RLISGSADSTIRIWDLNTGK 620
Query: 503 CLDNIVEGHGQIN 465
L + G I+
Sbjct: 621 PLMVLPSNSGYIS 633
Score = 27.5 bits (58), Expect = 1.9
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDV 516
+S AD + IW TG P++ D I+S DGS KLWDV
Sbjct: 603 ISGSADSTIRIWDLNTG-KPLMVLPSNSGYISSFVSDE-HKIIS-GNDGSVKLWDV 655
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 27.5 bits (58), Expect = 1.9
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 560 IVSVSRDGSAKLWDVGKSNCLDNIVEGHGQINCCTI 453
++S S DG KLWD+ ++ L + + T+
Sbjct: 1194 LISASSDGEVKLWDIRMNHSLQTFSTDNSGLTSLTV 1229
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 27.5 bits (58), Expect = 1.9
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -1
Query: 281 GQSIIIGCNNGKVVQLNLQDGNLISELYESASPV 180
G + GCN+G + +L G ++ +Y +PV
Sbjct: 158 GLFLAAGCNDGSIWMWSLPSGKVVQVMYGHTAPV 191
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 27.1 bits (57), Expect = 2.5
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = -1
Query: 542 DGSAKLWDVGKSNCLDNIVEGHGQI 468
DG+ K+WD+ ++C ++++GH I
Sbjct: 198 DGAIKIWDLRNNHC-SHVLKGHKDI 221
Score = 25.8 bits (54), Expect = 5.8
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = -1
Query: 677 AGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIV-SVSRDGSAKLWDVGKSNC 501
+ +D W A +G GH G ++ SVS D + K+WD +C
Sbjct: 111 SSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDC 170
Query: 500 LDNIVE 483
+ I E
Sbjct: 171 IKTIEE 176
Score = 25.4 bits (53), Expect = 7.7
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = -1
Query: 674 GADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDV 516
G DG+ IW + GH G +++S S D + +++DV
Sbjct: 196 GIDGAIKIWDLRNNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDV 248
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 611 GHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSNCLDNIV 486
GHT D G I++ S D + KLW + CL + +
Sbjct: 214 GHTDNVRDILISDDGRTILTASSDATIKLWSLRAQKCLFSFI 255
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/71 (22%), Positives = 25/71 (35%)
Frame = -1
Query: 680 SAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSNC 501
+AG I+ +G GH G ++S +G K+WD+ C
Sbjct: 204 AAGDSKMITIYDVLSGDQVGQLRGHAAWIFAVAFNPVGDLLLSADVEGKIKIWDIDTMEC 263
Query: 500 LDNIVEGHGQI 468
+ E G I
Sbjct: 264 ISTQSETDGAI 274
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 4.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETG 633
LS+G DG +W+ ETG
Sbjct: 277 LSSGKDGRAMVWNVETG 293
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 26.2 bits (55), Expect = 4.4
Identities = 17/71 (23%), Positives = 30/71 (42%)
Frame = -1
Query: 611 GHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSNCLDNIVEGHGQINCCTITTTTDEV 432
GH+ D G +V+ S DG+ + WD+ + +D+I T T D +
Sbjct: 570 GHSNRLTSFDFSDTGRWLVTASLDGTIRTWDLPTGHLIDSI-STPSVCTSLTFAPTGDYL 628
Query: 431 KVENEREIGTS 399
+ ++G S
Sbjct: 629 ATTHVDQVGIS 639
Score = 25.4 bits (53), Expect = 7.7
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 15/90 (16%)
Frame = -1
Query: 398 NKLLILGFESGLIMC--AHIAKR----QELFTKQIDSACNACI--------VVGQSIIIG 261
NK+L LGF G + ++KR QE F I S A + + G+ +I
Sbjct: 174 NKIL-LGFSDGALQIWNLRVSKRVHEFQEFFGDGITSLTQAPVLDVLAVGTISGRIVIFN 232
Query: 260 CNNGKVVQLNLQDGNLISELYES-ASPVLS 174
NG ++ QDG ++S + + +P+L+
Sbjct: 233 LKNGSILMEFKQDGQVLSCSFRTDGTPILA 262
>SPBC1677.03c |||threonine ammonia-lyase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 600
Score = 26.2 bits (55), Expect = 4.4
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = -1
Query: 443 TDEVKVENEREIGTSNKLLILGFESGLIMCAHIAKRQELFTKQIDSACNACIVVGQSII 267
T E+K N + +G + L F+ CA +AK Q L + I + ++ GQ I
Sbjct: 195 TPEIKWRNVKRLGANVLLHGANFDIAKAECARLAKEQNL--EVIHPFDDPYVIAGQGTI 251
>SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase
Ubp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 849
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -1
Query: 245 VVQLNLQDGNLISELYESASPVLSLTILANQMFAIGRQDGTCTVISL 105
+ ++++ DG+L+ E LS +I Q I ++ G C + +L
Sbjct: 238 IFEIDIADGSLLLEFQHPNGEWLSDSITKEQNLTINKEIGLCGLYNL 284
>SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr
2|||Manual
Length = 539
Score = 25.8 bits (54), Expect = 5.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 237 LYNLAIITTDNNRLTNDNACITR*INLLS 323
L N+A TTD R+ D+ + R I LLS
Sbjct: 144 LTNIASGTTDQTRIVVDSGAVPRFIQLLS 172
>SPCC1450.10c |||iron hydrogenase large subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = -1
Query: 305 ACNACIVVGQSIIIGCNNGKVVQLNLQDGNLISELYESASPVLSLTILA 159
AC+ CI +++++ + + V +L+ LY S SP + + A
Sbjct: 66 ACSGCITSAETVLVNLQSYQEVLKHLESRKSQEILYVSLSPQVRANLAA 114
>SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 25.8 bits (54), Expect = 5.8
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 563 NIVSVSRDGSAKLWDV 516
N+VS SRDGS WD+
Sbjct: 243 NLVSCSRDGSIIFWDM 258
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 25.4 bits (53), Expect = 7.7
Identities = 18/86 (20%), Positives = 34/86 (39%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDVGKSN 504
+S G D +W+ ++ GH I+S S D + ++W+ N
Sbjct: 69 VSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRN 128
Query: 503 CLDNIVEGHGQINCCTITTTTDEVKV 426
C+ I+ GH C ++++ V
Sbjct: 129 CI-AILTGHSHYVMCAAFHPSEDLIV 153
Score = 25.4 bits (53), Expect = 7.7
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = -1
Query: 683 LSAGADGSCXIWSAETGINPVLXXGHTMXXXXXXXXDRGXNIVSVSRDGSAKLWDV 516
LS D + IW+ ++ + GH+ IVS S D + ++WD+
Sbjct: 111 LSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDI 166
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -1
Query: 191 ASPVLSLTILANQMFAIGRQDGTCTVISLLEQHK 90
A+P S + + + I RQ G CT+++L++ HK
Sbjct: 963 AAPFTSKLAVVSSITNIVRQ-GRCTLVALVQMHK 995
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,623,693
Number of Sequences: 5004
Number of extensions: 48699
Number of successful extensions: 231
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 315915086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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