Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_P06
         (304 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    27   0.21 
DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domai...    24   1.5  
DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.        23   2.5  
AY341214-1|AAR13778.1|  260|Anopheles gambiae SRPN9 protein.           23   2.5  
AY341213-1|AAR13777.1|  260|Anopheles gambiae SRPN9 protein.           23   2.5  
AY341212-1|AAR13776.1|  260|Anopheles gambiae SRPN9 protein.           23   2.5  
AY341211-1|AAR13775.1|  260|Anopheles gambiae SRPN9 protein.           23   2.5  
AY341210-1|AAR13774.1|  260|Anopheles gambiae SRPN9 protein.           23   2.5  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   3.4  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -2

Query: 243 ASKWQSQRIIQIITKTAKLTEMVSKSXRKTRHESTL 136
           A +W  + + Q+  +  K+TE + +  +KTR +  L
Sbjct: 676 AKRWDEKHMAQLKLQKEKITEELKEVMKKTRRQGEL 711


>DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 161

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -2

Query: 294 RPADASVLSSESKWIENASKWQSQRIIQIITKTAKLTEMVSKSXRKTRH 148
           R A AS+ SSES ++ NA +   + I   IT+ + L +       + RH
Sbjct: 68  RDASASLDSSESLYMGNAFRNYYESIHGAITRKSTLNDGGCNCAVRIRH 116


>DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/27 (33%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = -2

Query: 261 SKWIENASKWQSQRIIQ--IITKTAKL 187
           ++W+ENA++ Q + +++   IT+  KL
Sbjct: 182 NRWVENATRGQIKDLLEPGAITRNTKL 208


>AY341214-1|AAR13778.1|  260|Anopheles gambiae SRPN9 protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/27 (33%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = -2

Query: 261 SKWIENASKWQSQRIIQ--IITKTAKL 187
           ++W+ENA++ Q + +++   IT+  KL
Sbjct: 56  NRWVENATRGQIKDLLEPGAITRNTKL 82


>AY341213-1|AAR13777.1|  260|Anopheles gambiae SRPN9 protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/27 (33%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = -2

Query: 261 SKWIENASKWQSQRIIQ--IITKTAKL 187
           ++W+ENA++ Q + +++   IT+  KL
Sbjct: 56  NRWVENATRGQIKDLLEPGAITRNTKL 82


>AY341212-1|AAR13776.1|  260|Anopheles gambiae SRPN9 protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/27 (33%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = -2

Query: 261 SKWIENASKWQSQRIIQ--IITKTAKL 187
           ++W+ENA++ Q + +++   IT+  KL
Sbjct: 56  NRWVENATRGQIKDLLEPGAITRNTKL 82


>AY341211-1|AAR13775.1|  260|Anopheles gambiae SRPN9 protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/27 (33%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = -2

Query: 261 SKWIENASKWQSQRIIQ--IITKTAKL 187
           ++W+ENA++ Q + +++   IT+  KL
Sbjct: 56  NRWVENATRGQIKDLLEPGAITRNTKL 82


>AY341210-1|AAR13774.1|  260|Anopheles gambiae SRPN9 protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/27 (33%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = -2

Query: 261 SKWIENASKWQSQRIIQ--IITKTAKL 187
           ++W+ENA++ Q + +++   IT+  KL
Sbjct: 56  NRWVENATRGQIKDLLEPGAITRNTKL 82


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 122 FGSMPRVDSCLVFLXLF-DTISVSFAVLVMICM 217
           F +   +D+C  F+    DT+ V F VL +IC+
Sbjct: 610 FKNQEPLDTCKEFMFEGQDTLQVIFIVLGLICI 642


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 289,137
Number of Sequences: 2352
Number of extensions: 4534
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19557855
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)