Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_P06
(304 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49148-1|CAA89008.1| 159|Homo sapiens ribosomal protein L29 pro... 48 5e-06
U49083-1|AAC50647.1| 159|Homo sapiens HIP protein. 48 5e-06
U10248-1|AAC50499.1| 159|Homo sapiens ribosomal protein L29 pro... 48 5e-06
BC071909-1|AAH71909.1| 161|Homo sapiens ribosomal protein L29 p... 48 5e-06
BC071663-1|AAH71663.1| 159|Homo sapiens ribosomal protein L29 p... 48 5e-06
BC070481-1|AAH70481.1| 159|Homo sapiens ribosomal protein L29 p... 48 5e-06
BC070190-1|AAH70190.1| 159|Homo sapiens ribosomal protein L29 p... 48 5e-06
BC008926-1|AAH08926.1| 159|Homo sapiens ribosomal protein L29 p... 48 5e-06
AL450405-1|CAI16223.1| 172|Homo sapiens protein ( Human DNA seq... 48 5e-06
BC034740-1|AAH34740.1| 381|Homo sapiens TRPV5 protein protein. 29 3.5
AY206695-1|AAO13488.1| 729|Homo sapiens transient receptor pote... 29 3.5
AJ487965-1|CAD32312.2| 729|Homo sapiens transient receptor pote... 29 3.5
AJ271207-1|CAB96365.2| 729|Homo sapiens epithelial calcium chan... 29 3.5
AF304464-1|AAL04015.1| 729|Homo sapiens calcium transport prote... 29 3.5
AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250... 28 6.2
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ... 28 6.2
AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome assoc... 28 6.2
>Z49148-1|CAA89008.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -1
Query: 235 MAKSKNHTNHNQNRKAHRNGIKKXKEDQ 152
MAKSKNHT HNQ+RK HRNGIKK + +
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQR 28
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = -2
Query: 171 KSXRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQLARAAERKATXRSK 25
K R R+ES G+DPKFLRN RF KK N K K++ + + R++
Sbjct: 22 KKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKMQANNAKAMSARAE 70
>U49083-1|AAC50647.1| 159|Homo sapiens HIP protein.
Length = 159
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -1
Query: 235 MAKSKNHTNHNQNRKAHRNGIKKXKEDQ 152
MAKSKNHT HNQ+RK HRNGIKK + +
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQR 28
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = -2
Query: 171 KSXRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQLARAAERKATXRSK 25
K R R+ES G+DPKFLRN RF KK N K K++ + + R++
Sbjct: 22 KKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKMQANNAKAMSARAE 70
>U10248-1|AAC50499.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -1
Query: 235 MAKSKNHTNHNQNRKAHRNGIKKXKEDQ 152
MAKSKNHT HNQ+RK HRNGIKK + +
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQR 28
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = -2
Query: 171 KSXRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQLARAAERKATXRSK 25
K R R+ES G+DPKFLRN RF KK N K K++ + + R++
Sbjct: 22 KKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKMQANNAKAMSARAE 70
>BC071909-1|AAH71909.1| 161|Homo sapiens ribosomal protein L29
protein.
Length = 161
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -1
Query: 235 MAKSKNHTNHNQNRKAHRNGIKKXKEDQ 152
MAKSKNHT HNQ+RK HRNGIKK + +
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQR 28
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = -2
Query: 171 KSXRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQLARAAERKATXRSK 25
K R R+ES G+DPKFLRN RF KK N K K++ + + R++
Sbjct: 22 KKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKMQANNAKAMSARAE 70
>BC071663-1|AAH71663.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -1
Query: 235 MAKSKNHTNHNQNRKAHRNGIKKXKEDQ 152
MAKSKNHT HNQ+RK HRNGIKK + +
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQR 28
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = -2
Query: 171 KSXRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQLARAAERKATXRSK 25
K R R+ES G+DPKFLRN RF KK N K K++ + + R++
Sbjct: 22 KKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKMQANNAKAMSARAE 70
>BC070481-1|AAH70481.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -1
Query: 235 MAKSKNHTNHNQNRKAHRNGIKKXKEDQ 152
MAKSKNHT HNQ+RK HRNGIKK + +
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQR 28
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = -2
Query: 171 KSXRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQLARAAERKATXRSK 25
K R R+ES G+DPKFLRN RF KK N K K++ + + R++
Sbjct: 22 KKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKMQANNAKAMSARAE 70
>BC070190-1|AAH70190.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -1
Query: 235 MAKSKNHTNHNQNRKAHRNGIKKXKEDQ 152
MAKSKNHT HNQ+RK HRNGIKK + +
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQR 28
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = -2
Query: 171 KSXRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQLARAAERKATXRSK 25
K R R+ES G+DPKFLRN RF KK N K K++ + + R++
Sbjct: 22 KKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKMQANNAKAMSARAE 70
>BC008926-1|AAH08926.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -1
Query: 235 MAKSKNHTNHNQNRKAHRNGIKKXKEDQ 152
MAKSKNHT HNQ+RK HRNGIKK + +
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQR 28
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = -2
Query: 171 KSXRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQLARAAERKATXRSK 25
K R R+ES G+DPKFLRN RF KK N K K++ + + R++
Sbjct: 22 KKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKMQANNAKAMSARAE 70
>AL450405-1|CAI16223.1| 172|Homo sapiens protein ( Human DNA
sequence from clone RP11-632C17 on chromosome 6 Contains
the gene for a novel protein similar to ribosomal
protein L29 ).
Length = 172
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -1
Query: 235 MAKSKNHTNHNQNRKAHRNGIKKXKEDQ 152
MAKSKNHT HNQ+RK HRNGIKK + +
Sbjct: 16 MAKSKNHTTHNQSRKWHRNGIKKPRSQR 43
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = -2
Query: 171 KSXRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQLARAAERKATXRSK 25
K R R+ES G+DPKFLRN RF KK N K K++ + + R++
Sbjct: 37 KKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKMQANNAKAMSARAE 85
>BC034740-1|AAH34740.1| 381|Homo sapiens TRPV5 protein protein.
Length = 381
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 178 HFCELCGFGYDLYDSLTLPF*CVFNPLRFRGQNRSIGR 291
+FC L Y LY + CV+ PL+FRG NR+ R
Sbjct: 328 YFCILAAL-YLLY-MICFTTCCVYRPLKFRGGNRTHSR 363
>AY206695-1|AAO13488.1| 729|Homo sapiens transient receptor
potential cation channel, subfamily V, member 5 protein.
Length = 729
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 178 HFCELCGFGYDLYDSLTLPF*CVFNPLRFRGQNRSIGR 291
+FC L Y LY + CV+ PL+FRG NR+ R
Sbjct: 328 YFCILAAL-YLLY-MICFTTCCVYRPLKFRGGNRTHSR 363
>AJ487965-1|CAD32312.2| 729|Homo sapiens transient receptor
potential cation channel subfamily V, member 5 protein.
Length = 729
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 178 HFCELCGFGYDLYDSLTLPF*CVFNPLRFRGQNRSIGR 291
+FC L Y LY + CV+ PL+FRG NR+ R
Sbjct: 328 YFCILAAL-YLLY-MICFTTCCVYRPLKFRGGNRTHSR 363
>AJ271207-1|CAB96365.2| 729|Homo sapiens epithelial calcium channel
protein.
Length = 729
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 178 HFCELCGFGYDLYDSLTLPF*CVFNPLRFRGQNRSIGR 291
+FC L Y LY + CV+ PL+FRG NR+ R
Sbjct: 328 YFCILAAL-YLLY-MICFTTCCVYRPLKFRGGNRTHSR 363
>AF304464-1|AAL04015.1| 729|Homo sapiens calcium transport protein
CaT2 protein.
Length = 729
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 178 HFCELCGFGYDLYDSLTLPF*CVFNPLRFRGQNRSIGR 291
+FC L Y LY + CV+ PL+FRG NR+ R
Sbjct: 328 YFCILAAL-YLLY-MICFTTCCVYRPLKFRGGNRTHSR 363
>AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
protein.
Length = 2442
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/75 (20%), Positives = 31/75 (41%)
Frame = -1
Query: 247 KRIKMAKSKNHTNHNQNRKAHRNGIKKXKEDQARIHPWHGSKIFKESKVLQEG*PEASQA 68
+++ A+ + T Q + AH + + +E + WH ++ K + L+ E
Sbjct: 831 RQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKMELEMR 890
Query: 67 TREGG*EKSYXEKQR 23
+E E + QR
Sbjct: 891 LKEQQTEMEAIQAQR 905
>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associated
protein 1 protein.
Length = 2442
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/75 (20%), Positives = 31/75 (41%)
Frame = -1
Query: 247 KRIKMAKSKNHTNHNQNRKAHRNGIKKXKEDQARIHPWHGSKIFKESKVLQEG*PEASQA 68
+++ A+ + T Q + AH + + +E + WH ++ K + L+ E
Sbjct: 831 RQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKMELEMR 890
Query: 67 TREGG*EKSYXEKQR 23
+E E + QR
Sbjct: 891 LKEQQTEMEAIQAQR 905
>AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome associated
protein protein.
Length = 2442
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/75 (20%), Positives = 31/75 (41%)
Frame = -1
Query: 247 KRIKMAKSKNHTNHNQNRKAHRNGIKKXKEDQARIHPWHGSKIFKESKVLQEG*PEASQA 68
+++ A+ + T Q + AH + + +E + WH ++ K + L+ E
Sbjct: 831 RQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKMELEMR 890
Query: 67 TREGG*EKSYXEKQR 23
+E E + QR
Sbjct: 891 LKEQQTEMEAIQAQR 905
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,413,208
Number of Sequences: 237096
Number of extensions: 697362
Number of successful extensions: 1744
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1744
length of database: 76,859,062
effective HSP length: 77
effective length of database: 58,602,670
effective search space used: 1347861410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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