Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_P06
(304 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82256-2|CAB05115.1| 62|Caenorhabditis elegans Hypothetical pr... 53 3e-08
AL032657-13|CAB76744.1| 87|Caenorhabditis elegans Hypothetical... 44 3e-05
AL032625-6|CAN86641.1| 167|Caenorhabditis elegans Hypothetical ... 42 6e-05
Z73896-8|CAA98061.1| 525|Caenorhabditis elegans Hypothetical pr... 29 0.64
Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical p... 29 0.64
Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical p... 29 0.64
U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 28 1.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 1.5
AF039046-1|AAB94210.1| 458|Caenorhabditis elegans F-box a prote... 28 1.5
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 27 2.6
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 27 2.6
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 27 2.6
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 27 2.6
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 27 2.6
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 27 2.6
U41019-2|AAA82328.1| 518|Caenorhabditis elegans Hypothetical pr... 27 2.6
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 27 2.6
AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger t... 27 2.6
AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger t... 27 2.6
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 27 2.6
L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical pr... 26 4.5
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 26 4.5
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 26 4.5
Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical p... 25 7.9
Z72512-8|CAH04717.1| 583|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z48055-7|CAO78722.1| 452|Caenorhabditis elegans Hypothetical pr... 25 7.9
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 25 7.9
AF043697-2|AAB97556.1| 820|Caenorhabditis elegans Patched relat... 25 7.9
AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical... 25 7.9
>Z82256-2|CAB05115.1| 62|Caenorhabditis elegans Hypothetical
protein B0513.3 protein.
Length = 62
Score = 53.2 bits (122), Expect = 3e-08
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = -1
Query: 235 MAKSKNHTNHNQNRKAHRNGIKKXKE 158
MAKSKNHTNHNQN+KAHRNGI K K+
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGITKPKK 26
Score = 29.1 bits (62), Expect = 0.64
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 144 STLGMDPKFLRNQRFCKKGNLKPAKQLARAAERKA 40
S G+D KF++N RF +K N +Q+ ++ E KA
Sbjct: 31 SMKGVDAKFIKNLRFSRKNN---KRQINKSVESKA 62
>AL032657-13|CAB76744.1| 87|Caenorhabditis elegans Hypothetical
protein Y47H9C.14 protein.
Length = 87
Score = 43.6 bits (98), Expect = 3e-05
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = -1
Query: 229 KSKNHTNHNQNRKAHRNGIKKXKE 158
K +NHTNHN+N KAHRNGI K K+
Sbjct: 14 KPENHTNHNRNNKAHRNGITKPKK 37
>AL032625-6|CAN86641.1| 167|Caenorhabditis elegans Hypothetical
protein Y37H9A.5 protein.
Length = 167
Score = 42.3 bits (95), Expect = 6e-05
Identities = 18/23 (78%), Positives = 18/23 (78%)
Frame = -1
Query: 229 KSKNHTNHNQNRKAHRNGIKKXK 161
KSKNHTNHNQN AHR GI K K
Sbjct: 80 KSKNHTNHNQNNTAHRIGITKPK 102
>Z73896-8|CAA98061.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 29.1 bits (62), Expect = 0.64
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = -2
Query: 294 RPADASVLSSESKWIENASKWQSQRIIQIITKTAKLTEMVSKSXRKTRHESTLGMDPKFL 115
R + S+ S + W+E + + I++ ++K+ +VSKS + RH P +
Sbjct: 94 RTSKRSIGSMDQAWLEIIDRLTIEDAIRLRRTSSKVDNLVSKSLKSMRHLDVQMHCPSVI 153
Query: 114 RN 109
R+
Sbjct: 154 RD 155
>Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 29.1 bits (62), Expect = 0.64
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = -2
Query: 294 RPADASVLSSESKWIENASKWQSQRIIQIITKTAKLTEMVSKSXRKTRHESTLGMDPKFL 115
R + S+ S + W+E + + I++ ++K+ +VSKS + RH P +
Sbjct: 94 RTSKRSIGSMDQAWLEIIDRLTIEDAIRLRRTSSKVDNLVSKSLKSMRHLDVQMHCPSVI 153
Query: 114 RN 109
R+
Sbjct: 154 RD 155
>Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.6a protein.
Length = 525
Score = 29.1 bits (62), Expect = 0.64
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = -2
Query: 294 RPADASVLSSESKWIENASKWQSQRIIQIITKTAKLTEMVSKSXRKTRHESTLGMDPKFL 115
R + S+ S + W+E + + I++ ++K+ +VSKS + RH P +
Sbjct: 94 RTSKRSIGSMDQAWLEIIDRLTIEDAIRLRRTSSKVDNLVSKSLKSMRHLDVQMHCPSVI 153
Query: 114 RN 109
R+
Sbjct: 154 RD 155
>U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical
protein R04E5.8b protein.
Length = 142
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -1
Query: 211 NHNQNRKAHRN--GIKKXKEDQARIH 140
NHNQ+R HRN G + +D++R H
Sbjct: 81 NHNQDRNRHRNHDGNRHQNQDRSRHH 106
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -1
Query: 211 NHNQNRKAHRN--GIKKXKEDQARIH 140
NHNQ+R HRN G + +D++R H
Sbjct: 925 NHNQDRNRHRNHDGNRHQNQDRSRHH 950
>AF039046-1|AAB94210.1| 458|Caenorhabditis elegans F-box a protein
protein 195 protein.
Length = 458
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 155 VFLXLFDTISVSFAVLVMICMIL*LCHFDAFSIHLDSEDRTEASAGRIHL 304
++L +S S V + I IL + HFD IHL ++D + ++HL
Sbjct: 335 IYLKKIRVLSPS-PVSIPIDAILHMTHFDVSVIHLSTDDVAKIKNVKVHL 383
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/36 (33%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = -2
Query: 273 LSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSK 169
+ SE +++ENA ++Q++ IIQ + ++TEM+ +
Sbjct: 657 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQ 692
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/36 (33%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = -2
Query: 273 LSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSK 169
+ SE +++ENA ++Q++ IIQ + ++TEM+ +
Sbjct: 725 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQ 760
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/36 (33%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = -2
Query: 273 LSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSK 169
+ SE +++ENA ++Q++ IIQ + ++TEM+ +
Sbjct: 725 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQ 760
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/36 (33%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = -2
Query: 273 LSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSK 169
+ SE +++ENA ++Q++ IIQ + ++TEM+ +
Sbjct: 725 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQ 760
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/36 (33%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = -2
Query: 273 LSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSK 169
+ SE +++ENA ++Q++ IIQ + ++TEM+ +
Sbjct: 725 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQ 760
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
protein T05A10.1i protein.
Length = 1927
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/36 (33%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = -2
Query: 273 LSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSK 169
+ SE +++ENA ++Q++ IIQ + ++TEM+ +
Sbjct: 725 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQ 760
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
protein T05A10.1j protein.
Length = 1509
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/36 (33%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = -2
Query: 273 LSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSK 169
+ SE +++ENA ++Q++ IIQ + ++TEM+ +
Sbjct: 725 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQ 760
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical
protein T05A10.1c protein.
Length = 1692
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/36 (33%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = -2
Query: 273 LSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSK 169
+ SE +++ENA ++Q++ IIQ + ++TEM+ +
Sbjct: 283 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQ 318
>U41019-2|AAA82328.1| 518|Caenorhabditis elegans Hypothetical
protein C04E7.3 protein.
Length = 518
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -2
Query: 201 KTAKLTEMVSKSXRKTRHESTLGMDPKFLRNQRFCKKGNLK 79
KTA E+ K R+E +D FLRN R+ K GNLK
Sbjct: 332 KTANNRELAKKMMSMERNE----VD--FLRNARYSKHGNLK 366
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 27.1 bits (57), Expect = 2.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 175 YHFCELCGFGYDLYDSL 225
Y+FC++CGFG DS+
Sbjct: 1685 YYFCKVCGFGSTSADSV 1701
>AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 781
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/36 (33%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = -2
Query: 273 LSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSK 169
+ SE +++ENA ++Q++ IIQ + ++TEM+ +
Sbjct: 305 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQ 340
>AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 909
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/36 (33%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = -2
Query: 273 LSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSK 169
+ SE +++ENA ++Q++ IIQ + ++TEM+ +
Sbjct: 657 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQ 692
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 27.1 bits (57), Expect = 2.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 175 YHFCELCGFGYDLYDSL 225
Y+FC++CGFG DS+
Sbjct: 1685 YYFCKVCGFGSTSADSV 1701
>L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical
protein F44E2.3 protein.
Length = 244
Score = 26.2 bits (55), Expect = 4.5
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Frame = -2
Query: 291 PADASVLSSESKWIENASKWQSQRII-QIITKTAKLTEMVSKSXRKTRHES----TLGMD 127
P D S+ S E KW ++I+ Q+ + +L M+++ R+E ++
Sbjct: 90 PVDTSIPFDVSTLNEPTKKWLEEKIVEQVSARVHQLEAMMAEKATSARNEMEKMLRAQIE 149
Query: 126 PKFLRNQRFCKK---GNLKPAKQLARAAERK 43
+ CKK + K KQL ERK
Sbjct: 150 AEMAVELAECKKRDEESRKKCKQLEAELERK 180
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -2
Query: 291 PADASVLSSESKWIEN--ASKWQSQRIIQIITKTAKLTE 181
P ++LS KW+ + + KWQ RI IT+ AK+T+
Sbjct: 268 PLVLAILSKCGKWMTDSLSEKWQQHRI--QITEKAKMTK 304
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -2
Query: 291 PADASVLSSESKWIEN--ASKWQSQRIIQIITKTAKLTE 181
P ++LS KW+ + + KWQ RI IT+ AK+T+
Sbjct: 268 PLVLAILSKCGKWMTDSLSEKWQQHRI--QITEKAKMTK 304
>Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical
protein B0564.6b protein.
Length = 423
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/52 (23%), Positives = 25/52 (48%)
Frame = -2
Query: 264 ESKWIENASKWQSQRIIQIITKTAKLTEMVSKSXRKTRHESTLGMDPKFLRN 109
+ W+E + + I++ ++K+ +VSKS + RH P +R+
Sbjct: 2 DQAWLEIIDRLTIEDAIRLRRTSSKVDNLVSKSLKSMRHLDVQMHCPSVIRD 53
>Z72512-8|CAH04717.1| 583|Caenorhabditis elegans Hypothetical
protein R07B5.8b protein.
Length = 583
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 226 TLPF*CVFNPLRFRGQNRSIGR 291
+LP V LR RG NRS+GR
Sbjct: 496 SLPVGSVKKELRSRGHNRSVGR 517
>Z48055-7|CAO78722.1| 452|Caenorhabditis elegans Hypothetical
protein T07A5.7 protein.
Length = 452
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -1
Query: 247 KRIKMAKSKNHTNHNQNRKAHRNGIKKXKEDQARIHPWHGSKIFKESKVLQ 95
+R K A KN N+N N+K+ K KED + H + +E + L+
Sbjct: 207 QRRKEANKKNSKNYNFNKKSKE---AKLKEDLEKNHLYIERATAQEKQTLE 254
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 25.4 bits (53), Expect = 7.9
Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = -2
Query: 240 SKWQSQRIIQIITKTAKLTEMVSKSXRK--TRHESTLGMDPKFLRNQRFCKKGNLKPAKQ 67
S+W + + + +T +L EMV KS + + +G F+ + ++ P +
Sbjct: 1195 SQWAERGVPKSHVETYELMEMVKKSEKPIVVHCSNGIGRSMAFIGTEYLARQVEADPTIE 1254
Query: 66 LARAAERKATXRSKGQEMN 10
L A + R G + N
Sbjct: 1255 LTEALKHLHEHRWNGVQTN 1273
>AF043697-2|AAB97556.1| 820|Caenorhabditis elegans Patched related
family protein 11 protein.
Length = 820
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 149 CLVFLXLFDTISVSFAVLVMICMIL 223
C VF+ F+ ++V +V+ IC +L
Sbjct: 655 CFVFIANFNAVAVITSVIASICYVL 679
>AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical
protein Y110A7A.16 protein.
Length = 1250
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 279 SVLSSESKWIENASKWQSQRIIQIIT 202
+VLS +W+EN SQ I+ +IT
Sbjct: 1146 NVLSENYRWLENIGNELSQLILVLIT 1171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,464,282
Number of Sequences: 27780
Number of extensions: 107492
Number of successful extensions: 379
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 379
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 323867940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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