Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_P04
         (681 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0491 - 18283404-18283482,18283590-18283658,18283767-182838...    31   1.1  
01_07_0238 + 42209407-42209964,42210039-42210561,42212577-422126...    30   1.5  
11_01_0612 + 4902197-4902929,4903443-4904071                           29   3.4  
09_04_0559 + 18516732-18516746,18516893-18517330                       29   4.5  
07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733           29   4.5  
06_03_0854 + 25400855-25403741,25406174-25407708                       28   6.0  

>10_08_0491 -
           18283404-18283482,18283590-18283658,18283767-18283883,
           18283953-18284068,18284149-18284223,18284248-18284430,
           18284530-18284591,18284668-18285606,18285723-18285846,
           18285917-18286060,18286151-18286225,18286359-18286382,
           18287025-18287095,18287305-18287407,18287555-18287781,
           18287910-18288027,18288220-18288311,18288793-18288874
          Length = 899

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -2

Query: 680 KPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDK 501
           K SA  +EGS+    ++P  + K+D  PN+         I  P+  +   LA +  ++DK
Sbjct: 464 KISAYSSEGSSFIPVVVPRHIPKVDSGPNLSKVLTTDLTIVEPQDIERGGLAVDCGEDDK 523


>01_07_0238 +
           42209407-42209964,42210039-42210561,42212577-42212665,
           42212981-42213191,42213265-42213446,42213573-42213812,
           42214691-42214878,42215230-42215323,42215407-42215463,
           42215552-42215686,42216460-42216525,42216745-42216858,
           42217849-42218010,42218093-42218221,42218323-42218424,
           42219428-42219504,42219600-42219957
          Length = 1094

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -2

Query: 674 SATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADA 537
           SA  A GSAD AA        + L PN+ S  +++P     E+A A
Sbjct: 83  SALQAAGSADPAAASALASLLVILLPNIPSSPSSLPPASASESASA 128


>11_01_0612 + 4902197-4902929,4903443-4904071
          Length = 453

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = -2

Query: 644 SAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLAD 522
           +AA  PN V  ID+       AAA P  + PEAA  P L D
Sbjct: 25  AAAAAPNQVA-IDVVVVHHHGAAAAPGQQAPEAAPVPHLLD 64


>09_04_0559 + 18516732-18516746,18516893-18517330
          Length = 150

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = -2

Query: 680 KPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDK 501
           +P+  +AE + +  A  P    + + A   E  A    E+K  EAA AP   +  V+E  
Sbjct: 80  EPAEPEAEPAKEEVAPEPAAAAEAE-AKEAEPAAQVAEEVKEEEAAPAPAAEEVKVEEAA 138

Query: 500 P 498
           P
Sbjct: 139 P 139


>07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733
          Length = 181

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
 Frame = -2

Query: 659 EGSADSAAIIPNMVKKIDL-------APNVESDAAAVPEIKTPEAADAPKLADNPVD--E 507
           +GSA S  I  N  + ++L       AP + S   AVP    P A D P LAD P +  E
Sbjct: 82  DGSAASFGISINHTRALELPGVCKVQAPPI-SQCTAVPT--PPPAPDTPTLADEPAETNE 138

Query: 506 DKPA 495
           D+P+
Sbjct: 139 DEPS 142


>06_03_0854 + 25400855-25403741,25406174-25407708
          Length = 1473

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
 Frame = -2

Query: 677 PSATDAEGSADSAAIIPN----MVKKIDLAPNVESDAAAVPEIKTPEAA 543
           PSA  A   A + ++ PN     V    LAP   + AAA P +  P AA
Sbjct: 618 PSAAPAPAPASAPSLEPNDIIAPVVSSTLAPGASAAAAAAPAVAPPAAA 666


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,426,305
Number of Sequences: 37544
Number of extensions: 219090
Number of successful extensions: 628
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)