Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_P02
         (578 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6RZS1 Cluster: Putative uncharacterized protein; n=2; ...    32   8.5  
UniRef50_A6QXQ0 Cluster: Predicted protein; n=1; Ajellomyces cap...    32   8.5  

>UniRef50_A6RZS1 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 585

 Score = 32.3 bits (70), Expect = 8.5
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = -2

Query: 532 RRPQWRAEVRRFPPDKKKPTVLVLSRARGPRHGH 431
           R+P WR + R  PP    PT       R   HGH
Sbjct: 437 RKPAWRRDDRGLPPRPPPPTDFAYDGGRSDSHGH 470


>UniRef50_A6QXQ0 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 269

 Score = 32.3 bits (70), Expect = 8.5
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = +3

Query: 33  LQNLQVQNCDMFIYNSFIINSSLRSYSI*ITINKKSHCFS*FW 161
           L NLQ++  DMFI N+ I +S LR+Y+     N  S  F   W
Sbjct: 123 LLNLQLRYADMFIQNNAIDSSRLRTYASATAGNFPSDIFPELW 165


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,566,404
Number of Sequences: 1657284
Number of extensions: 9483745
Number of successful extensions: 21464
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21457
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)