Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_P02
         (578 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   3.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.3  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    22   4.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.6  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 165 HWHVTKLHRVP 197
           HWH+T  H  P
Sbjct: 243 HWHITDSHSFP 253


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 45  QVQNCDMFIYNSFIINSSLRSYS 113
           Q   CD    N  ++NS ++S+S
Sbjct: 260 QCNKCDYTCVNKSMLNSHMKSHS 282


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 45  QVQNCDMFIYNSFIINSSLRSYS 113
           Q   CD    N  ++NS ++S+S
Sbjct: 18  QCNKCDYTCVNKSMLNSHMKSHS 40


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 25  NNSYKTYKCKTVICLYTIRSL 87
           NN++KTY   T    Y++  L
Sbjct: 103 NNNFKTYSNVTTCSYYSLDDL 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,955
Number of Sequences: 336
Number of extensions: 2626
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)