Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_P02
         (578 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   3.1  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   4.1  
Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related prot...    23   7.2  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    23   7.2  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +3

Query: 453 ARLRTRTVGFFLSGGNRRTSALHWGRRAEHVGV 551
           AR+      F L GG  R+  L W  R  H  V
Sbjct: 353 ARMHAFVKSFLLLGGTVRSKMLDWIGRCLHANV 385


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +3

Query: 411 NLLNCAMCPCRGPRARLRTRTVGFFLSGGNRRTSALHWGR 530
           N L C M   RGP++R R + +   +     R     WGR
Sbjct: 755 NALTCLMPNKRGPKSRSRRQLIN--VGNSIIRYGVATWGR 792


>Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related
           protease protein.
          Length = 273

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = +3

Query: 69  IYNSFIINSSLRSYSI*ITINKKSHC-FS*FWQHWHVTKLHRVPKY 203
           I   F+I+ +   Y I +  N K HC  S     W +T  H +  Y
Sbjct: 47  IVGGFVIDIADAPYQISLQYNGKHHCGGSILNSKWILTAAHCIDLY 92


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -2

Query: 553 STPTCSARRPQWRAEVRRFPPDKKKPTVLVLSRARGPR 440
           +TPT   RR Q   E +R PP ++   +   + A  P+
Sbjct: 85  TTPTPQPRRMQQHQEKQRQPPQQQHQQIGPSTSAAPPQ 122


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,310
Number of Sequences: 2352
Number of extensions: 10385
Number of successful extensions: 63
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)