Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_P02
         (578 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78065-9|CAI79172.1|  273|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z78064-11|CAI79210.1|  273|Caenorhabditis elegans Hypothetical p...    30   1.4  
Z78064-10|CAB01510.3|  299|Caenorhabditis elegans Hypothetical p...    28   4.2  

>Z78065-9|CAI79172.1|  273|Caenorhabditis elegans Hypothetical
           protein F57B1.8 protein.
          Length = 273

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 18/72 (25%), Positives = 34/72 (47%)
 Frame = +2

Query: 284 KHTINNEQLFLNEKYSFVFCPLQLISFKIIITTSSLFRFIRYELIKLCNVSVSWPPGAAK 463
           K  +N+ +L + ++   +FCP Q+ S   ++  +  F      +IK    +     GAA 
Sbjct: 170 KSALNSYELTILKQAILIFCPFQISSSVFLLCQTVKFELAMAFMIKRIINTAEILAGAAT 229

Query: 464 N*NCWFFFVRRK 499
              C+FFF  ++
Sbjct: 230 --PCFFFFTSKE 239


>Z78064-11|CAI79210.1|  273|Caenorhabditis elegans Hypothetical
           protein F57B1.8 protein.
          Length = 273

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 18/72 (25%), Positives = 34/72 (47%)
 Frame = +2

Query: 284 KHTINNEQLFLNEKYSFVFCPLQLISFKIIITTSSLFRFIRYELIKLCNVSVSWPPGAAK 463
           K  +N+ +L + ++   +FCP Q+ S   ++  +  F      +IK    +     GAA 
Sbjct: 170 KSALNSYELTILKQAILIFCPFQISSSVFLLCQTVKFELAMAFMIKRIINTAEILAGAAT 229

Query: 464 N*NCWFFFVRRK 499
              C+FFF  ++
Sbjct: 230 --PCFFFFTSKE 239


>Z78064-10|CAB01510.3|  299|Caenorhabditis elegans Hypothetical
           protein F57B1.1 protein.
          Length = 299

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 19/72 (26%), Positives = 33/72 (45%)
 Frame = +2

Query: 284 KHTINNEQLFLNEKYSFVFCPLQLISFKIIITTSSLFRFIRYELIKLCNVSVSWPPGAAK 463
           K  +N  +L + ++  F+FC  Q+ S   ++  +  F      LIK    +     GAA 
Sbjct: 200 KAALNKYELTILKQAVFIFCLFQISSSVFLLCQTIKFEIATAFLIKRIINTTEICAGAAT 259

Query: 464 N*NCWFFFVRRK 499
              C+FFF  ++
Sbjct: 260 --PCFFFFTSKE 269


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,257,155
Number of Sequences: 27780
Number of extensions: 239951
Number of successful extensions: 518
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)