Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_O12
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 223 1e-58
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 173 8e-44
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 158 4e-39
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 144 6e-35
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 100 9e-22
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 33 0.28
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 33 0.28
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical pr... 30 1.5
DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping... 30 1.5
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 30 1.5
AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical ... 30 1.5
U41276-3|AAA82470.2| 517|Caenorhabditis elegans Hypothetical pr... 30 2.0
AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cycl... 30 2.0
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 28 6.0
AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical ... 28 6.0
U00067-6|AAL08037.1| 167|Caenorhabditis elegans Hypothetical pr... 28 7.9
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 223 bits (545), Expect = 1e-58
Identities = 103/192 (53%), Positives = 138/192 (71%)
Frame = -1
Query: 738 VPVPVPQXRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLNDGXXXXXX 559
VPV V +G ++ +DEE+ +VNF+KFT L TVFQK+ GT+TA NASTLNDG
Sbjct: 218 VPVNVKSKKGVTIV-DKDEEFTKVNFDKFTSLRTVFQKD-GTITAANASTLNDGAAAVIV 275
Query: 558 XXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEA 379
++KP+ARI+ + D P+DF +AP + PK+LE+ GV++ DVA WE+NEA
Sbjct: 276 ASQEAVSEQSLKPLARILAYGDAATHPLDFAVAPTLMFPKILERAGVKQSDVAQWEVNEA 335
Query: 378 FSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNG 199
FS V +A K LG+DPS +N HGGAVS+GHPIGMSGAR++ HL H LK G+ GVA+ICNG
Sbjct: 336 FSCVPLAFIKKLGVDPSLVNPHGGAVSIGHPIGMSGARLITHLVHTLKSGQIGVAAICNG 395
Query: 198 GGGASSVMIEKM 163
GGG+S ++I+K+
Sbjct: 396 GGGSSGMVIQKL 407
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 173 bits (422), Expect = 8e-44
Identities = 89/193 (46%), Positives = 127/193 (65%), Gaps = 1/193 (0%)
Frame = -1
Query: 738 VPVPVPQXRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKEN-GTVTAGNASTLNDGXXXXX 562
VPV V R + V+ EDEEYK++ K + L VF ++ GT+T NAS+LNDG
Sbjct: 200 VPVSVKTSR-SEVVITEDEEYKKLIESKVSSLKPVFVRDGTGTITPANASSLNDGAVATV 258
Query: 561 XXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINE 382
+ P+A +V FA+ PIDF +AP A+ LL+K+G++ D+ALWE+NE
Sbjct: 259 VVGENALPQ-GAHPLAELVAFAEAGRAPIDFTVAPVDAVRLLLKKSGLQVSDIALWELNE 317
Query: 381 AFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICN 202
AF+V +A K L ++PS +NV GGAV++GHP+GMSG RIV L ++L G+ GVA+ICN
Sbjct: 318 AFAVTVLAFIKELNIEPSVVNVKGGAVAIGHPLGMSGLRIVNSLAYSLAPGQLGVAAICN 377
Query: 201 GGGGASSVMIEKM 163
GGG A++V+I+K+
Sbjct: 378 GGGEATAVLIKKL 390
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 158 bits (383), Expect = 4e-39
Identities = 76/192 (39%), Positives = 115/192 (59%)
Frame = -1
Query: 738 VPVPVPQXRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLNDGXXXXXX 559
V V V +G + +D+ K ++ + S++ GT++ + + DG
Sbjct: 270 VAVNVKSKKGVEAV-KQDDITKIKKIKEGSVYSSIPIFPGGTISDKHIAAFTDGAAAVIL 328
Query: 558 XXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEA 379
N+KP+ARI+ + D +DF +AP + P LL+ GV + DVA WE+NEA
Sbjct: 329 ASQEAVSEQNLKPLARILAYGDAATHQLDFAVAPTLLFPNLLQSAGVEQSDVAQWEVNEA 388
Query: 378 FSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNG 199
FS V +A K LG+DPS +N HGGAVS+GHPIGMSGA ++ HL H L+ G+ GVA++C+G
Sbjct: 389 FSCVPLAFIKKLGVDPSLVNPHGGAVSIGHPIGMSGASLITHLVHTLESGQIGVAALCDG 448
Query: 198 GGGASSVMIEKM 163
GG+S ++I+K+
Sbjct: 449 DGGSSGMVIQKL 460
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 144 bits (349), Expect = 6e-35
Identities = 74/180 (41%), Positives = 110/180 (61%), Gaps = 2/180 (1%)
Frame = -1
Query: 696 FAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPI 517
F DE + E KL VFQK+ G V AGNAS ++DG K N+KP+
Sbjct: 216 FEIDEHPRATTAESLAKLKPVFQKD-GLVNAGNASGISDGAAALVVAGEDSVKSKNLKPL 274
Query: 516 ARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGL 337
AR+V ++ CDP I PA AI ++L+K+G++ D+ ++E+NEAF+ A+A Q+ LG+
Sbjct: 275 ARVVAYSAVGCDPTIMGIGPAPAIREVLKKSGLKIGDIDIFEVNEAFAPQALAVQRELGI 334
Query: 336 DPSKINVHGGAVSLGHPIGMSGARIVVHLCHAL--KKGEKGVASICNGGGGASSVMIEKM 163
K+NV+GGA++LGHP+ SGARI H+ H L + + G+ S C GGG +++ EK+
Sbjct: 335 PMEKLNVNGGAIALGHPLAASGARISTHIVHELHRRNVKYGIGSACIGGGQGIAILFEKV 394
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 100 bits (240), Expect = 9e-22
Identities = 71/208 (34%), Positives = 98/208 (47%), Gaps = 20/208 (9%)
Frame = -1
Query: 732 VPVPQXRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXX 553
VPV P ED + EK + L F K +GTVTA NAS L DG
Sbjct: 237 VPVFLDGKKPKTIKEDNGIRVSTLEKLSSLKPAFVKPHGTVTAANASYLTDGASAALIMT 296
Query: 552 XXXAKRLNVKPIARIVGFADGECDPID-FPIAPAVAIPKLLEKTGVRKEDVALWEINEAF 376
A KP A + + DP D ++PA IPKLL+K G+ +DV ++EI+EAF
Sbjct: 297 EEYALANGYKPKAYLRDYLYVAQDPKDQLLLSPAYVIPKLLDKAGLTLKDVDVFEIHEAF 356
Query: 375 SVVAVANQKLLGLD-----------------PSKINVHGGAVSLGHPIGMSGARIVVHLC 247
+ +AN + D K+N+ GG++S+GHP G +G R+ H
Sbjct: 357 AGQVLANLNAMDSDYFCKEQMKRSGKFGRVPMDKLNLWGGSLSIGHPFGATGVRLATHSA 416
Query: 246 HALK--KGEKGVASICNGGGGASSVMIE 169
H LK KG+ V + C GG ++IE
Sbjct: 417 HRLKEEKGQYAVIAACAAGGHGVGMLIE 444
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 324 INVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICN 202
IN GG +S GHPIG +G V L + L +G+ G + N
Sbjct: 341 INPSGGLISKGHPIGATGVAQAVELSNQL-RGKCGKRQVPN 380
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 324 INVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICN 202
IN GG +S GHPIG +G V L + L +G+ G + N
Sbjct: 341 INPSGGLISKGHPIGATGVAQAVELSNQL-RGKCGKRQVPN 380
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 155 STYIFSIITDDAPPPPLQIEATPFSPFFK 241
S+ IFS + PPPP+ +ATP P +K
Sbjct: 400 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 428
>Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 155 STYIFSIITDDAPPPPLQIEATPFSPFFK 241
S+ IFS + PPPP+ +ATP P +K
Sbjct: 423 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 451
>DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping
protein protein.
Length = 770
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 155 STYIFSIITDDAPPPPLQIEATPFSPFFK 241
S+ IFS + PPPP+ +ATP P +K
Sbjct: 384 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 412
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 155 STYIFSIITDDAPPPPLQIEATPFSPFFK 241
S+ IFS + PPPP+ +ATP P +K
Sbjct: 400 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 428
>AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 155 STYIFSIITDDAPPPPLQIEATPFSPFFK 241
S+ IFS + PPPP+ +ATP P +K
Sbjct: 423 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 451
>U41276-3|AAA82470.2| 517|Caenorhabditis elegans Hypothetical
protein C52B11.3 protein.
Length = 517
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 7 HTLIHFQIFNFNLLTIYKNFFYLIPTLTKKYLKQCT 114
H L+ +F+ LLT+ N +I TKKYL+ T
Sbjct: 42 HPLLAIALFSICLLTVAGNCLVVIAVCTKKYLRNPT 77
>AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cyclase
protein 4 protein.
Length = 954
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -1
Query: 348 LLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSVMIE 169
+LGL + +V V+L + + G VH+ A + KG + G GG+ S +E
Sbjct: 348 VLGLKKWQFDVWSNDVTLANQMESGGLAGRVHITDATRSYLKGAYILEEGNGGSRSKFLE 407
Query: 168 K 166
K
Sbjct: 408 K 408
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 319 CTWWSCQFGSSNWYVWSSHC 260
C+WWS G+SN Y +HC
Sbjct: 114 CSWWSGCGGNSNIYYSYNHC 133
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 319 CTWWSCQFGSSNWYVWSSHC 260
C+WWS G+SN Y +HC
Sbjct: 114 CSWWSGCGGNSNIYYSYNHC 133
>AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical
protein F57E7.3 protein.
Length = 330
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 319 CTWWSCQFGSSNWYVWSSHCCTSV 248
CTW F S+ WY+ +SH + +
Sbjct: 2 CTWRGSYFESAEWYLLASHLLSCI 25
>U00067-6|AAL08037.1| 167|Caenorhabditis elegans Hypothetical
protein F54E7.9 protein.
Length = 167
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +1
Query: 7 HTLIHFQIFNFNLLTIYKNFFYLIPTLTKKYLKQCT 114
H ++H Q N + YKN + + L +Y ++C+
Sbjct: 120 HAMLHVQTSNKTAIEFYKNRGFNVDCLVPQYYQRCS 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,520,929
Number of Sequences: 27780
Number of extensions: 351838
Number of successful extensions: 1058
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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