Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_O07
         (661 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0BYS8 Cluster: Chromosome undetermined scaffold_138, w...    36   1.1  
UniRef50_UPI00006CD1B7 Cluster: glutamine amidotransferase class...    33   4.6  
UniRef50_Q9M147 Cluster: Putative uncharacterized protein AT4g01...    33   4.6  
UniRef50_O04612 Cluster: A_IG002N01.24 protein; n=2; Arabidopsis...    33   4.6  
UniRef50_Q8ID46 Cluster: Putative uncharacterized protein MAL13P...    33   4.6  
UniRef50_Q09F58 Cluster: Heme maturase; n=4; Alveolata|Rep: Heme...    33   4.6  
UniRef50_Q7R0Q0 Cluster: GLP_79_38727_30874; n=1; Giardia lambli...    33   6.1  
UniRef50_Q8I5C8 Cluster: Putative uncharacterized protein; n=3; ...    33   8.0  

>UniRef50_A0BYS8 Cluster: Chromosome undetermined scaffold_138, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_138, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 1306

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
 Frame = -1

Query: 505  YLCKETESLLYYFLTKISVIYEFKIFIL*TDRIHVHSSFA----VLKLIILKFLLGHFNA 338
            YLCK+ ++ LYY L K    ++ +I  +   +I +   F     +L++++L         
Sbjct: 1034 YLCKD-DANLYYLLGKSK--FQEQITFIQPKKISLQDYFQFDAYILQILVLSQYFNQLKM 1090

Query: 337  KGAISLFSMIISVHHNND*NKLINSRIESQKIKRKQPKNKSLHHYN 200
               ++ F++II + +  + N+   S ++ Q++ +  P    LH YN
Sbjct: 1091 MCFMNAFTIIIQLEYRINSNEFSLSTLKFQQLWKYSPSLFDLHQYN 1136


>UniRef50_UPI00006CD1B7 Cluster: glutamine amidotransferase class-I
           family protein; n=1; Tetrahymena thermophila SB210|Rep:
           glutamine amidotransferase class-I family protein -
           Tetrahymena thermophila SB210
          Length = 1447

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
 Frame = +2

Query: 89  QKXFFMXXNFLRIN--SDLIYKSSNILFVLSISQLSFFFIVMVKRFIFWLFSF--DLLAF 256
           +  +F   NF+  N  SD+ YKS  I +VL +SQ  F  ++      F  +SF  D + F
Sbjct: 675 ENQYFGLLNFIIGNGHSDMNYKSVGISYVLQVSQSDFISVIKKDNVAFEKYSFLVDQIKF 734

Query: 257 N 259
           N
Sbjct: 735 N 735


>UniRef50_Q9M147 Cluster: Putative uncharacterized protein
           AT4g01210; n=2; Arabidopsis thaliana|Rep: Putative
           uncharacterized protein AT4g01210 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 963

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = +2

Query: 80  QKCQKXFFMXXNFLRINSDLIYKSSNILFVLSISQLSFFFIVMVKRFI 223
           Q+ Q+ FF+  N  R++   + KS N L  +SI  + FFF V+ + F+
Sbjct: 26  QQQQQQFFLQRNRSRLSRFFLLKSFNYLLWISIICVFFFFAVLFQMFL 73


>UniRef50_O04612 Cluster: A_IG002N01.24 protein; n=2; Arabidopsis
           thaliana|Rep: A_IG002N01.24 protein - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 981

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = +2

Query: 80  QKCQKXFFMXXNFLRINSDLIYKSSNILFVLSISQLSFFFIVMVKRFI 223
           Q+ Q+ FF+  N  R++   + KS N L  +SI  + FFF V+ + F+
Sbjct: 26  QQQQQQFFLQRNRSRLSRFFLLKSFNYLLWISIICVFFFFAVLFQMFL 73


>UniRef50_Q8ID46 Cluster: Putative uncharacterized protein
            MAL13P1.333; n=3; Plasmodium|Rep: Putative
            uncharacterized protein MAL13P1.333 - Plasmodium
            falciparum (isolate 3D7)
          Length = 3482

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -2

Query: 519  YKIFNIFVRRRKAYFIIF*LKFQS---FMNLKFLFYKLIEFMF 400
            Y IFNIF   +K Y   F   F +    +N KFL+ K+++  F
Sbjct: 2937 YNIFNIFCNNKKGYLFFFHNMFNNINLMINNKFLYNKMVDVFF 2979


>UniRef50_Q09F58 Cluster: Heme maturase; n=4; Alveolata|Rep: Heme
           maturase - Tetrahymena paravorax
          Length = 514

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +2

Query: 98  FFMXXNFLRINSDLIYKSSNILFVLSISQLSFFF--IVMVKRFIFWLFSFDLLAFNARVN 271
           FF+  N + IN    YK   ++F+  I  + FFF        +IF L +   L+ N  + 
Sbjct: 5   FFLNFNLININLSNYYKLIYLIFLQFIFSIEFFFKYNYFDSYYIFILNNITNLSTNYLI- 63

Query: 272 *FVLIVIMVYRNY 310
             + I+I+ Y+NY
Sbjct: 64  -IIFILILNYKNY 75


>UniRef50_Q7R0Q0 Cluster: GLP_79_38727_30874; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_79_38727_30874 - Giardia lamblia
           ATCC 50803
          Length = 2617

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
 Frame = -1

Query: 568 FLRMSGDTSSLTYHIPL*--NL*YLCKETESLLYYFLTKISVIYEF-KIFIL*TDRIHVH 398
           FL M G   SL  HI L   N  Y     + L++YFLT I +IY F   F+L  + I   
Sbjct: 89  FLVM-GFVLSLALHISLTKGNTNYQAARAKRLVFYFLTSIRLIYAFGSSFLLFYNAIQKR 147

Query: 397 SSFAVLKLIILKFLLGHFNAKGAISLF 317
            +     LI+    + +F     +SLF
Sbjct: 148 FTLFFCHLIVAILSIFYFTIFNYMSLF 174


>UniRef50_Q8I5C8 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 1834

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 21/53 (39%), Positives = 30/53 (56%)
 Frame = +2

Query: 113 NFLRINSDLIYKSSNILFVLSISQLSFFFIVMVKRFIFWLFSFDLLAFNARVN 271
           NF  I + L+YK  N+LF L+IS  SF  I     + F L+SF +L    ++N
Sbjct: 813 NFFHILNFLMYKKKNVLFYLTIS--SFLKI----NYEFVLYSFPILTEQNKIN 859


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,408,913
Number of Sequences: 1657284
Number of extensions: 9113255
Number of successful extensions: 22298
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22266
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)