Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_O07
         (661 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   2.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.6  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   4.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   4.5  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   6.0  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/60 (21%), Positives = 22/60 (36%)
 Frame = +2

Query: 53  FSTFSGRXVQKCQKXFFMXXNFLRINSDLIYKSSNILFVLSISQLSFFFIVMVKRFIFWL 232
           F  F       CQ+ F    N+  +  DLI+      +  ++  +    +V      FWL
Sbjct: 266 FDEFGDSKCSLCQRRFEEQGNYSCLKVDLIFTRDRAFYFTTVF-IPGIILVTSSFITFWL 324


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -1

Query: 499 CKETESLLYY 470
           CKET SLLYY
Sbjct: 107 CKETFSLLYY 116


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 580 KLLFFLRMSGDTSSLTYHIPL 518
           K+ FFL    ++++ +Y IPL
Sbjct: 619 KMFFFLSSMDESNTKSYEIPL 639


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 580 KLLFFLRMSGDTSSLTYHIPL 518
           K+ FFL    ++++ +Y IPL
Sbjct: 619 KMFFFLSSMDESNTKSYEIPL 639


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/25 (28%), Positives = 17/25 (68%)
 Frame = +2

Query: 275 FVLIVIMVYRNYHAKQRYRTFSVEV 349
           F+LI   ++  +++  R+R F++E+
Sbjct: 16  FILINYFIFLYFNSLVRFRRFTIEL 40


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,954
Number of Sequences: 438
Number of extensions: 3008
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)