Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_O01
         (664 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3MEC0 Cluster: Methyltransferase FkbM; n=2; Nostocacea...    33   8.1  
UniRef50_Q042Y9 Cluster: Predicted SAM-dependent methyltransfera...    33   8.1  

>UniRef50_Q3MEC0 Cluster: Methyltransferase FkbM; n=2;
           Nostocaceae|Rep: Methyltransferase FkbM - Anabaena
           variabilis (strain ATCC 29413 / PCC 7937)
          Length = 550

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +3

Query: 342 IWSSFNKFSFLLIKNKNEISHSLQSLVRTEKIYQKP*IYNITSIKQR*FHFHK 500
           +W   +   F   KN + +SHSL +L RT K ++   +  +++I Q   H HK
Sbjct: 424 VWDKDDVLKFYAPKNSDHVSHSLLNLQRTSKYFEAK-VKRLSTIMQE--HNHK 473


>UniRef50_Q042Y9 Cluster: Predicted SAM-dependent methyltransferase;
           n=5; Lactobacillus|Rep: Predicted SAM-dependent
           methyltransferase - Lactobacillus gasseri (strain ATCC
           33323 / DSM 20243)
          Length = 237

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 385 IKTKYPIHYSLWLGQKKYTRNLKFIISQA*NRD 483
           +K K P+ +  W  Q KY +NLK  +++A N+D
Sbjct: 186 LKEKNPVFFKKWTNQLKYYQNLKTNLNKAKNKD 218


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,147,609
Number of Sequences: 1657284
Number of extensions: 8611330
Number of successful extensions: 17540
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17537
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)