Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_N23
(717 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 105 4e-23
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 105 4e-23
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 105 4e-23
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 105 4e-23
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 104 6e-23
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 104 6e-23
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 68 6e-12
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 68 6e-12
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 50 2e-06
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 50 2e-06
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 50 2e-06
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 50 2e-06
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 50 2e-06
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 50 2e-06
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 50 2e-06
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 49 4e-06
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 49 4e-06
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 49 4e-06
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 49 4e-06
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 49 4e-06
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 49 4e-06
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 29 4.4
Z11505-5|CAA77589.1| 435|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 105 bits (251), Expect = 4e-23
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = -1
Query: 717 QELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQY 565
QELFKR SEQFTAMFRRKAF WYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 105 bits (251), Expect = 4e-23
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = -1
Query: 717 QELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQY 565
QELFKR SEQFTAMFRRKAF WYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 105 bits (251), Expect = 4e-23
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = -1
Query: 717 QELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQY 565
QELFKR SEQFTAMFRRKAF WYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 105 bits (251), Expect = 4e-23
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = -1
Query: 717 QELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQY 565
QELFKR SEQFTAMFRRKAF WYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 104 bits (250), Expect = 6e-23
Identities = 47/51 (92%), Positives = 48/51 (94%)
Frame = -1
Query: 717 QELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQY 565
QELFKR SEQFTAMFRRKAF WYTGEGMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQY 425
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 104 bits (250), Expect = 6e-23
Identities = 47/51 (92%), Positives = 48/51 (94%)
Frame = -1
Query: 717 QELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQY 565
QELFKR SEQFTAMFRRKAF WYTGEGMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQY 425
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 68.1 bits (159), Expect = 6e-12
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -1
Query: 717 QELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQY 565
QE KR S+QF +FRRKAF WYT M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 373 QEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQY 420
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 68.1 bits (159), Expect = 6e-12
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -1
Query: 717 QELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQY 565
QE KR S+QF +FRRKAF WYT M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 373 QEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQY 420
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = -1
Query: 717 QELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQ 568
QE + R +F M+ ++AF WY GEGM+E EF+EA +M L +Y++
Sbjct: 385 QEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = -1
Query: 714 ELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQ 568
E + R +F M+ ++AF WY GEGM+E EFTEA ++ L +Y++
Sbjct: 384 EAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = -1
Query: 714 ELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQ 568
E + R +F M+ ++AF WY GEGM+E EF+EA +M L +Y++
Sbjct: 392 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 440
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = -1
Query: 714 ELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQ 568
E + R +F M+ ++AF WY GEGM+E EFTEA ++ L +Y++
Sbjct: 384 EAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = -1
Query: 714 ELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQ 568
E + R +F M+ ++AF WY GEGM+E EFTEA ++ L +Y++
Sbjct: 384 EAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = -1
Query: 714 ELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQ 568
E + R +F M+ ++AF WY GEGM+E EFTEA ++ L +Y++
Sbjct: 384 EAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = -1
Query: 714 ELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQ 568
E + R +F M+ ++AF WY GEGM+E EFTEA ++ L +Y++
Sbjct: 384 EAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = -1
Query: 714 ELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQ 568
E + R +F M+ ++AF WY GEGM+E EFTEA ++ L +Y++
Sbjct: 384 EAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = -1
Query: 714 ELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQ 568
E + R +F M+ ++AF WY GEGM+E EFTEA ++ L +Y++
Sbjct: 21 EAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = -1
Query: 714 ELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQ 568
E + R +F M+ ++AF WY GEGM+E EF+EA +M L +Y++
Sbjct: 364 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 412
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = -1
Query: 714 ELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQ 568
E ++R +F M+ ++AF WY GEGM+E EF+EA ++ L +Y++
Sbjct: 381 EAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = -1
Query: 714 ELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQ 568
E + R +F M+ ++AF WY GEGM+E EF+EA ++ L +Y++
Sbjct: 386 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = -1
Query: 714 ELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQ 568
E + R +F M+ ++AF WY GEGM+E EF+EA ++ L +Y++
Sbjct: 391 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 439
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = -1
Query: 714 ELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQ 568
E + R +F M+ ++AF WY GEGM+E EF+EA ++ L +Y++
Sbjct: 385 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = -1
Query: 714 ELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQ 568
E + R +F M+ ++AF WY GEGM+E EF+EA ++ L +Y++
Sbjct: 386 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = -1
Query: 714 ELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQ 568
E + R +F M+ ++AF WY GEGM+E EF+EA ++ L +Y++
Sbjct: 386 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 45.2 bits (102), Expect = 5e-05
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = -1
Query: 714 ELFKRXSEQFTAMFRRKAFXXWYTGEGMDEMEFTEAESNMNDLVSEYQQ 568
E + R +F M+ ++AF W+ GEGM+E EF EA ++ L +Y +
Sbjct: 389 EAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAE 437
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 507 RSPAPAPRQTLRPRRRWPPGTVGTRRQGRSCCSQPQ*TPSRP-CPRRCTXARKPCA 671
RSPA APR+ P+RR P RR+ S S+ + P P PR+ + + P A
Sbjct: 482 RSPAAAPRRRQSPQRRRSP----RRRRSPSSSSRSRSPPPPPRRPRQDSEQQAPVA 533
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 504 PRSPAPAPRQTLRPRRRWPPGTVGTRRQGRSCCSQPQ*TPSRP 632
P P P Q +P +R PPG G G P P RP
Sbjct: 177 PSGPPGPPGQPGQPGQRGPPGEPGALLPGGDAPPGPSGPPGRP 219
>Z11505-5|CAA77589.1| 435|Caenorhabditis elegans Hypothetical
protein F59B2.8 protein.
Length = 435
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -2
Query: 296 FLDYEGQLWDV-YCSKQLPSTTRALQLSMRAVL*HYHTKGKD 174
F DY G L D+ CSK++ T R + ++ HY T GKD
Sbjct: 24 FFDY-GDLLDISLCSKRMAQTVRDIHITADL---HYLTLGKD 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,767,140
Number of Sequences: 27780
Number of extensions: 230058
Number of successful extensions: 598
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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