Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_N22
         (330 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   3.0  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   3.9  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    21   9.1  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    21   9.1  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 119 IPQSVYDITSNFFR 160
           IP+ +YDI  N+FR
Sbjct: 576 IPKYLYDIIGNYFR 589


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 294 VLEFLIKNYFKHNDALFCTNMLRN 223
           +++ ++ N   H   + CTNML+N
Sbjct: 50  LIDAVLSNVDLHWSCIGCTNMLKN 73


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 97  NTQVSND*HKYLKKPVX*RN 38
           NTQ+ ND ++ LKK    RN
Sbjct: 698 NTQMINDLYRLLKKYTGLRN 717


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 97  NTQVSND*HKYLKKPVX*RN 38
           NTQ+ ND ++ LKK    RN
Sbjct: 698 NTQMINDLYRLLKKYTGLRN 717


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 328,452
Number of Sequences: 2352
Number of extensions: 6848
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22910151
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)