Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_N22
         (330 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119654-1|AAM50308.1|  574|Drosophila melanogaster RE74287p pro...    28   3.3  
AE013599-653|AAF59087.2|  574|Drosophila melanogaster CG8695-PA ...    28   3.3  
V00204-3|CAA23493.1|  505|Drosophila melanogaster protein L prot...    27   7.5  
AE014297-1481|AAF54781.2| 1169|Drosophila melanogaster CG10042-P...    27   7.5  
AE013599-654|AAF59086.1|  579|Drosophila melanogaster CG8693-PA ...    27   7.5  

>AY119654-1|AAM50308.1|  574|Drosophila melanogaster RE74287p
           protein.
          Length = 574

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 297 FVLEFLIKNYFKHNDALFCTNMLRNWSTSIPEGQ-ENW 187
           F  E L K  +  +DA   + ++ NW  ++PEGQ  NW
Sbjct: 317 FNFELLAKISYS-SDAYHYSELIHNWLDNMPEGQVANW 353


>AE013599-653|AAF59087.2|  574|Drosophila melanogaster CG8695-PA
           protein.
          Length = 574

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 297 FVLEFLIKNYFKHNDALFCTNMLRNWSTSIPEGQ-ENW 187
           F  E L K  +  +DA   + ++ NW  ++PEGQ  NW
Sbjct: 317 FNFELLAKISYS-SDAYHYSELIHNWLDNMPEGQVANW 353


>V00204-3|CAA23493.1|  505|Drosophila melanogaster protein L
           protein.
          Length = 505

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -1

Query: 258 NDALFCTNMLRNWSTSIPEGQ-ENW 187
           +DA   + ++ NW  ++PEGQ  NW
Sbjct: 329 SDAYHYSELIHNWLDNMPEGQVANW 353


>AE014297-1481|AAF54781.2| 1169|Drosophila melanogaster CG10042-PB,
           isoform B protein.
          Length = 1169

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
 Frame = -2

Query: 215 HQFPKDKKIGRLWLK----AI*RE--KSSRLCRKHFVESDYENI 102
           H FP D  I  +W+K    ++ R+  KS  +C +HF   D+  I
Sbjct: 25  HSFPLDPIIRAIWIKNSRISLERQITKSVLVCSRHFRRLDFNTI 68


>AE013599-654|AAF59086.1|  579|Drosophila melanogaster CG8693-PA
           protein.
          Length = 579

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = -1

Query: 282 LIKNYFKHNDALFCTNMLRNWSTSIPEGQE-NW 187
           LI N    +DA     ++ NW   +PEG+  NW
Sbjct: 323 LISNLHYDSDAYHYEYLINNWLNLMPEGKSANW 355


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,326,983
Number of Sequences: 53049
Number of extensions: 251737
Number of successful extensions: 576
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)