Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_N22
         (330 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72502-1|CAA96585.2|  430|Caenorhabditis elegans Hypothetical pr...    30   0.45 
U41552-8|AAC69099.2|  771|Caenorhabditis elegans Hypothetical pr...    29   0.79 
Z92831-1|CAB07367.1|  332|Caenorhabditis elegans Hypothetical pr...    28   1.4  
U22831-4|AAK20066.1|  633|Caenorhabditis elegans Hypothetical pr...    27   2.4  
Z81458-1|CAB03820.1|  274|Caenorhabditis elegans Hypothetical pr...    26   5.5  
U14635-5|AAN63442.1|  464|Caenorhabditis elegans Hypothetical pr...    26   5.5  
U14635-4|AAL02446.1|  459|Caenorhabditis elegans Hypothetical pr...    26   5.5  
U14635-3|AAN63441.1|  491|Caenorhabditis elegans Hypothetical pr...    26   5.5  
U14635-2|AAC46656.2|  522|Caenorhabditis elegans Hypothetical pr...    26   5.5  
AL021386-2|CAA16165.1|  240|Caenorhabditis elegans Hypothetical ...    26   5.5  
Z68214-1|CAA92444.1|  846|Caenorhabditis elegans Hypothetical pr...    26   7.3  
AL117202-22|CAB57900.1|  691|Caenorhabditis elegans Hypothetical...    26   7.3  

>Z72502-1|CAA96585.2|  430|Caenorhabditis elegans Hypothetical
           protein C08B6.2 protein.
          Length = 430

 Score = 29.9 bits (64), Expect = 0.45
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -1

Query: 279 IKNYF-KHNDALFCTNMLRNWSTSIPEGQENWKTVVKGHL 163
           I  YF K +++ FC + L+N + SI E ++N+K  +   L
Sbjct: 5   IFQYFRKRSNSKFCGSFLQNVTESIRENEQNYKKTINNKL 44


>U41552-8|AAC69099.2|  771|Caenorhabditis elegans Hypothetical
           protein K07E3.2 protein.
          Length = 771

 Score = 29.1 bits (62), Expect = 0.79
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = -1

Query: 246 FCTNMLRN--WSTSIPEGQENWK 184
           F T +LRN  W+ +I EG E WK
Sbjct: 496 FATRLLRNCLWTAAIKEGTEGWK 518


>Z92831-1|CAB07367.1|  332|Caenorhabditis elegans Hypothetical
           protein F22G12.3 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -1

Query: 306 HSIFVLEFLIKNYFKHNDALFCTNMLRNWSTSIPEGQENWK 184
           + ++++ F IK Y+   D L C N  R   T++ +   +WK
Sbjct: 79  YDVWIISFGIKRYYP--DTLSCMNYYRLLQTNLEDKTADWK 117


>U22831-4|AAK20066.1|  633|Caenorhabditis elegans Hypothetical
           protein F47D12.5 protein.
          Length = 633

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 218 LQFLSILVQNNASLCLK*FLIKNSNTNIECYGN 316
           L  L+ + QN+A  C K    +  N  +EC+GN
Sbjct: 438 LDILTQITQNSADACEKLAECEEMNVLLECFGN 470


>Z81458-1|CAB03820.1|  274|Caenorhabditis elegans Hypothetical
           protein C03E10.1 protein.
          Length = 274

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 53  WFLQIFMLIV*HLCIY*CFHSQIPQSVYDITSNFFRV 163
           WFLQI ++    LC++  +  +I +S + + S+ F V
Sbjct: 114 WFLQIILIHFGALCVF-VYLQKIDKSAFALLSSVFAV 149


>U14635-5|AAN63442.1|  464|Caenorhabditis elegans Hypothetical
           protein C27H5.2d protein.
          Length = 464

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -1

Query: 279 IKNYFKH-NDALFCTNMLRNWSTSIPEGQENWKTV 178
           ++  F H +D L C N   NW+  + E Q++W  V
Sbjct: 386 LERRFAHVDDELACVN--ENWAKELKEKQQDWDKV 418


>U14635-4|AAL02446.1|  459|Caenorhabditis elegans Hypothetical
           protein C27H5.2b protein.
          Length = 459

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -1

Query: 279 IKNYFKH-NDALFCTNMLRNWSTSIPEGQENWKTV 178
           ++  F H +D L C N   NW+  + E Q++W  V
Sbjct: 386 LERRFAHVDDELACVN--ENWAKELKEKQQDWDKV 418


>U14635-3|AAN63441.1|  491|Caenorhabditis elegans Hypothetical
           protein C27H5.2c protein.
          Length = 491

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -1

Query: 279 IKNYFKH-NDALFCTNMLRNWSTSIPEGQENWKTV 178
           ++  F H +D L C N   NW+  + E Q++W  V
Sbjct: 386 LERRFAHVDDELACVN--ENWAKELKEKQQDWDKV 418


>U14635-2|AAC46656.2|  522|Caenorhabditis elegans Hypothetical
           protein C27H5.2a protein.
          Length = 522

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -1

Query: 279 IKNYFKH-NDALFCTNMLRNWSTSIPEGQENWKTV 178
           ++  F H +D L C N   NW+  + E Q++W  V
Sbjct: 386 LERRFAHVDDELACVN--ENWAKELKEKQQDWDKV 418


>AL021386-2|CAA16165.1|  240|Caenorhabditis elegans Hypothetical
           protein F57E7.2 protein.
          Length = 240

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -3

Query: 247 ILYQYAQKLEYINSRRTRKLEDCG*RPFDAKKVRGYVVNTLWNLTMK-TLVNTQ 89
           +LY++  K  YIN   +  +E+      D +K+R    N  W L  K T  NTQ
Sbjct: 133 LLYKFKAKKNYINYLCSTAIEEGIFNKADTEKIR----NNYWKLQYKYTYPNTQ 182


>Z68214-1|CAA92444.1|  846|Caenorhabditis elegans Hypothetical
           protein C10C5.1 protein.
          Length = 846

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 66  YLC*SFDTCVFTNVFIVRFHKVFT 137
           Y+C   DT +F ++ +VRFH   T
Sbjct: 93  YICNRSDTTLFRSIGLVRFHPTGT 116


>AL117202-22|CAB57900.1|  691|Caenorhabditis elegans Hypothetical
           protein Y47D3A.28 protein.
          Length = 691

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -1

Query: 285 FLIKNYFKHNDALFCTNMLRNWSTSIPEGQENWKTVVKGHLT 160
           ++ K       AL   ++ +N STS P+  + WKT  K  LT
Sbjct: 64  YVKKRELTEQGALLKRHLEKNSSTSGPKATDAWKTNKKSVLT 105


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,369,817
Number of Sequences: 27780
Number of extensions: 145094
Number of successful extensions: 385
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)