Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_N13
         (833 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122199-1|AAM52711.1|  308|Drosophila melanogaster LD46156p pro...   124   1e-28
AE013599-3120|AAF46666.1|  296|Drosophila melanogaster CG10527-P...   124   1e-28
AY069859-1|AAL40004.1|  313|Drosophila melanogaster SD10415p pro...    35   0.16 
AE013599-3342|AAF46805.1|  585|Drosophila melanogaster CG6698-PA...    35   0.16 
AY071069-1|AAL48691.1|  753|Drosophila melanogaster RE14415p pro...    30   4.5  
AE014296-2896|AAF49350.4|  753|Drosophila melanogaster CG13728-P...    30   4.5  
AY060696-1|AAL28244.1|  291|Drosophila melanogaster GH13859p pro...    29   7.8  
AE013599-3338|AAM68209.1|  291|Drosophila melanogaster CG30281-P...    29   7.8  

>AY122199-1|AAM52711.1|  308|Drosophila melanogaster LD46156p
           protein.
          Length = 308

 Score =  124 bits (300), Expect = 1e-28
 Identities = 56/133 (42%), Positives = 79/133 (59%)
 Frame = -2

Query: 586 EFDTPDRLEYKFGPVASGSLEFDYRGPHNCHVSLTTHPAEVDPMYEIIIGGWENTQSVIR 407
           E +TPD+LEY+F P + G   F  R P + H++LT  P E  P++EI +GGWENT+SVIR
Sbjct: 16  EVNTPDKLEYQFFPASGGVFTFKVRSPKDAHLALTPAPEENGPIFEIFLGGWENTKSVIR 75

Query: 406 YCRQKPDKVTIPTPGIMNPNEFKKFLIEWRCGRLLVRDRTSGTVLMEWVDPAPFPVTHFG 227
             RQKP+   +PTPGI++  EF+ F + W    + V         + +   + FPV   G
Sbjct: 76  KDRQKPEVAEVPTPGILDAGEFRGFWVRWYDNVITVGREGDAAAFLSYDAGSLFPVNFVG 135

Query: 226 VRTGYGARGQWRI 188
           + TG+GA G W I
Sbjct: 136 ICTGWGASGTWLI 148



 Score =  111 bits (267), Expect = 1e-24
 Identities = 45/82 (54%), Positives = 62/82 (75%)
 Frame = -2

Query: 832 KSVIRXNRTKPDKVEIESPGILNGGEYRGFWVRWDSGIISAGREGEAIPFISWSDPEPFP 653
           KSVIR +R KP+  E+ +PGIL+ GE+RGFWVRW   +I+ GREG+A  F+S+     FP
Sbjct: 71  KSVIRKDRQKPEVAEVPTPGILDAGEFRGFWVRWYDNVITVGREGDAAAFLSYDAGSLFP 130

Query: 652 VYYVGVCTGWGATGSWKIEDGA 587
           V +VG+CTGWGA+G+W I++ A
Sbjct: 131 VNFVGICTGWGASGTWLIDEPA 152


>AE013599-3120|AAF46666.1|  296|Drosophila melanogaster CG10527-PA
           protein.
          Length = 296

 Score =  124 bits (300), Expect = 1e-28
 Identities = 56/133 (42%), Positives = 79/133 (59%)
 Frame = -2

Query: 586 EFDTPDRLEYKFGPVASGSLEFDYRGPHNCHVSLTTHPAEVDPMYEIIIGGWENTQSVIR 407
           E +TPD+LEY+F P + G   F  R P + H++LT  P E  P++EI +GGWENT+SVIR
Sbjct: 4   EVNTPDKLEYQFFPASGGVFTFKVRSPKDAHLALTPAPEENGPIFEIFLGGWENTKSVIR 63

Query: 406 YCRQKPDKVTIPTPGIMNPNEFKKFLIEWRCGRLLVRDRTSGTVLMEWVDPAPFPVTHFG 227
             RQKP+   +PTPGI++  EF+ F + W    + V         + +   + FPV   G
Sbjct: 64  KDRQKPEVAEVPTPGILDAGEFRGFWVRWYDNVITVGREGDAAAFLSYDAGSLFPVNFVG 123

Query: 226 VRTGYGARGQWRI 188
           + TG+GA G W I
Sbjct: 124 ICTGWGASGTWLI 136



 Score =  111 bits (267), Expect = 1e-24
 Identities = 45/82 (54%), Positives = 62/82 (75%)
 Frame = -2

Query: 832 KSVIRXNRTKPDKVEIESPGILNGGEYRGFWVRWDSGIISAGREGEAIPFISWSDPEPFP 653
           KSVIR +R KP+  E+ +PGIL+ GE+RGFWVRW   +I+ GREG+A  F+S+     FP
Sbjct: 59  KSVIRKDRQKPEVAEVPTPGILDAGEFRGFWVRWYDNVITVGREGDAAAFLSYDAGSLFP 118

Query: 652 VYYVGVCTGWGATGSWKIEDGA 587
           V +VG+CTGWGA+G+W I++ A
Sbjct: 119 VNFVGICTGWGASGTWLIDEPA 140


>AY069859-1|AAL40004.1|  313|Drosophila melanogaster SD10415p
           protein.
          Length = 313

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
 Frame = -2

Query: 493 VSLTTHPAEVDPMYEIIIGGWENTQSVIRYCRQKPDKVTIPTPGIMNPNEFKKF-LIEWR 317
           +S+T HP   D +YEI+IG   NT S IR         T   P +++  +     +++ +
Sbjct: 92  LSVTNHPRPNDRVYEIVIGAGGNTFSAIRNAMGMRRVATNQEPNLVSLYDPTPIEIVQNQ 151

Query: 316 CGRLLVR-DRTSGTVLMEWVDPAPFPVTHFGVRTGYGARGQW 194
            G L V         L++++D AP  + +    +      +W
Sbjct: 152 NGELFVYIPGFKKEPLLQFIDEAPLVINYLSFSSFGSNTARW 193


>AE013599-3342|AAF46805.1|  585|Drosophila melanogaster CG6698-PA
           protein.
          Length = 585

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
 Frame = -2

Query: 493 VSLTTHPAEVDPMYEIIIGGWENTQSVIRYCRQKPDKVTIPTPGIMNPNEFKKF-LIEWR 317
           +S+T HP   D +YEI+IG   NT S IR         T   P +++  +     +++ +
Sbjct: 92  LSVTNHPRPNDRVYEIVIGAGGNTFSAIRNAMGMRRVATNQEPNLVSLYDPTPIEIVQNQ 151

Query: 316 CGRLLVR-DRTSGTVLMEWVDPAPFPVTHFGVRTGYGARGQW 194
            G L V         L++++D AP  + +    +      +W
Sbjct: 152 NGELFVYIPGFKKEPLLQFIDEAPLVINYLSFSSFGSNTARW 193


>AY071069-1|AAL48691.1|  753|Drosophila melanogaster RE14415p
           protein.
          Length = 753

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +3

Query: 114 HPKSKGFSIILDTQRGCVPVLPKCVMRH*PRAPYPVRTPKCVTGKGAGSTH 266
           H K   F + LD      P  P  VMRH  +  Y + +P  +TG  A + H
Sbjct: 444 HLKRVPFKVNLDIYPVLPPSRPASVMRHPFQQDYALPSPAALTGTTAAAYH 494


>AE014296-2896|AAF49350.4|  753|Drosophila melanogaster CG13728-PA
           protein.
          Length = 753

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +3

Query: 114 HPKSKGFSIILDTQRGCVPVLPKCVMRH*PRAPYPVRTPKCVTGKGAGSTH 266
           H K   F + LD      P  P  VMRH  +  Y + +P  +TG  A + H
Sbjct: 444 HLKRVPFKVNLDIYPVLPPSRPASVMRHPFQQDYALPSPAALTGTTAAAYH 494


>AY060696-1|AAL28244.1|  291|Drosophila melanogaster GH13859p
           protein.
          Length = 291

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 28/88 (31%), Positives = 35/88 (39%)
 Frame = -2

Query: 727 SGIISAGREGEAIPFISWSDPEPFPVYYVGVCTGWGATGSWKIEDGAEFDTPDRLEYKFG 548
           S  ++AG     I  I     EPFPVY      G G T   + +DG+E       EY  G
Sbjct: 66  SSCLAAGINSNGIHVIEVPGLEPFPVYCDTRLAGSGWTVIQRRQDGSENFYRCWEEYSQG 125

Query: 547 PVASGSLEFDYRGPHNCHVSLTTHPAEV 464
                S EF + G    H   T  P E+
Sbjct: 126 -FGELSGEF-FMGLEKLHFLTTAEPYEL 151


>AE013599-3338|AAM68209.1|  291|Drosophila melanogaster CG30281-PA
           protein.
          Length = 291

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 28/88 (31%), Positives = 35/88 (39%)
 Frame = -2

Query: 727 SGIISAGREGEAIPFISWSDPEPFPVYYVGVCTGWGATGSWKIEDGAEFDTPDRLEYKFG 548
           S  ++AG     I  I     EPFPVY      G G T   + +DG+E       EY  G
Sbjct: 66  SSCLAAGINSNGIHVIEVPGLEPFPVYCDTRLAGSGWTVIQRRQDGSENFYRCWEEYSQG 125

Query: 547 PVASGSLEFDYRGPHNCHVSLTTHPAEV 464
                S EF + G    H   T  P E+
Sbjct: 126 -FGELSGEF-FMGLEKLHFLTTAEPYEL 151


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,511,604
Number of Sequences: 53049
Number of extensions: 1060550
Number of successful extensions: 3491
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3491
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)