Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_N09
(629 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08200-1|CAA69382.1| 567|Homo sapiens rab geranylgeranyl transf... 78 3e-14
CR541797-1|CAG46596.1| 567|Homo sapiens RABGGTA protein. 78 3e-14
BC003093-1|AAH03093.1| 567|Homo sapiens Rab geranylgeranyltrans... 78 3e-14
BX538330-1|CAD98099.1| 358|Homo sapiens hypothetical protein pr... 77 7e-14
BC117370-1|AAI17371.1| 1065|Homo sapiens leucine-rich repeats an... 31 3.4
BC117368-1|AAI17369.1| 1065|Homo sapiens leucine-rich repeats an... 31 3.4
AL357055-1|CAH73254.1| 1065|Homo sapiens leucine-rich repeats an... 31 3.4
AB018349-1|BAA34526.2| 1073|Homo sapiens KIAA0806 protein protein. 31 3.4
BC018739-1|AAH18739.1| 1050|Homo sapiens BUB1 budding uninhibite... 31 4.5
AF310214-1|AAL10712.1| 1050|Homo sapiens budding uninhibited by ... 31 4.5
AF107297-1|AAD11941.1| 1050|Homo sapiens mitotic checkpoint prot... 31 4.5
AF068760-1|AAC19118.1| 1050|Homo sapiens MAD3-like protein kinas... 31 4.5
AF053306-1|AAC06260.1| 1050|Homo sapiens mitotic checkpoint kina... 31 4.5
AF046918-1|AAC33435.1| 1050|Homo sapiens mitotic checkpoint prot... 31 4.5
AF046079-1|AAC12730.2| 1050|Homo sapiens BUBR1 protein. 31 4.5
AF035933-1|AAC23736.1| 1050|Homo sapiens protein kinase protein. 31 4.5
AB208782-1|BAD92019.1| 1091|Homo sapiens Mitotic checkpoint seri... 31 4.5
>Y08200-1|CAA69382.1| 567|Homo sapiens rab geranylgeranyl
transferase protein.
Length = 567
Score = 77.8 bits (183), Expect = 3e-14
Identities = 42/140 (30%), Positives = 79/140 (56%)
Frame = -1
Query: 530 LKDQLESCRQLLNLEPDSKWTMLTTTIFLHCIDAKAYHTESIQNLQKLKVIDKLRAGYYD 351
L+ +LESC++L LEP++KW +LT + + +D Y E++Q Q LK +D +RA Y D
Sbjct: 364 LQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFQTLKAVDPMRATYLD 423
Query: 350 DLIAKWCIEKQLCSDYENADLALKFSFPSPVSSLPYLQYYSHCDSVDLSNQQLTSNIFPS 171
DL +K+ +E + E A++ + ++ L +L+ +DLS+ +L + + P+
Sbjct: 424 DLRSKFLLENSVLK-MEYAEVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRT-LPPA 481
Query: 170 LIVLQHCKKLSLENNNLTTM 111
L L+ + L +N + ++
Sbjct: 482 LAALRCLEVLQASDNAIESL 501
>CR541797-1|CAG46596.1| 567|Homo sapiens RABGGTA protein.
Length = 567
Score = 77.8 bits (183), Expect = 3e-14
Identities = 42/140 (30%), Positives = 79/140 (56%)
Frame = -1
Query: 530 LKDQLESCRQLLNLEPDSKWTMLTTTIFLHCIDAKAYHTESIQNLQKLKVIDKLRAGYYD 351
L+ +LESC++L LEP++KW +LT + + +D Y E++Q Q LK +D +RA Y D
Sbjct: 364 LQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFQTLKAVDPMRATYLD 423
Query: 350 DLIAKWCIEKQLCSDYENADLALKFSFPSPVSSLPYLQYYSHCDSVDLSNQQLTSNIFPS 171
DL +K+ +E + E A++ + ++ L +L+ +DLS+ +L + + P+
Sbjct: 424 DLRSKFLLENSVLK-MEYAEVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRT-LPPA 481
Query: 170 LIVLQHCKKLSLENNNLTTM 111
L L+ + L +N + ++
Sbjct: 482 LAALRCLEVLQASDNAIESL 501
>BC003093-1|AAH03093.1| 567|Homo sapiens Rab
geranylgeranyltransferase, alpha subunit protein.
Length = 567
Score = 77.8 bits (183), Expect = 3e-14
Identities = 42/140 (30%), Positives = 79/140 (56%)
Frame = -1
Query: 530 LKDQLESCRQLLNLEPDSKWTMLTTTIFLHCIDAKAYHTESIQNLQKLKVIDKLRAGYYD 351
L+ +LESC++L LEP++KW +LT + + +D Y E++Q Q LK +D +RA Y D
Sbjct: 364 LQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFQTLKAVDPMRATYLD 423
Query: 350 DLIAKWCIEKQLCSDYENADLALKFSFPSPVSSLPYLQYYSHCDSVDLSNQQLTSNIFPS 171
DL +K+ +E + E A++ + ++ L +L+ +DLS+ +L + + P+
Sbjct: 424 DLRSKFLLENSVLK-MEYAEVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRT-LPPA 481
Query: 170 LIVLQHCKKLSLENNNLTTM 111
L L+ + L +N + ++
Sbjct: 482 LAALRCLEVLQASDNAIESL 501
>BX538330-1|CAD98099.1| 358|Homo sapiens hypothetical protein
protein.
Length = 358
Score = 76.6 bits (180), Expect = 7e-14
Identities = 44/147 (29%), Positives = 80/147 (54%), Gaps = 3/147 (2%)
Frame = -1
Query: 530 LKDQLESCRQLLNLEPDSKWTMLTTTIFLHCIDAKAYHTESIQNLQKLKVIDKLRAGYYD 351
L+ +LESC++L LEP++KW +LT + + +D Y E+++ LK +D +RA Y D
Sbjct: 155 LQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLEYFSTLKAVDPMRAAYLD 214
Query: 350 DLIAKWCIEKQLCSDYENADLALKFSFPSPVSSLPYLQYYSHCDSVDLSNQQLTSNIFPS 171
DL +K+ +E + E AD+ + ++ L +L+ +DLS+ +L + + P+
Sbjct: 215 DLRSKFLVENSVLK-MEYADVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRA-LPPA 272
Query: 170 LIVLQHCKKLSLENN---NLTTMKNFP 99
L L+ + L ++ NL + N P
Sbjct: 273 LAALRCLEVLQASDSVLENLDGVANLP 299
>BC117370-1|AAI17371.1| 1065|Homo sapiens leucine-rich repeats and
immunoglobulin-like domains 2 protein.
Length = 1065
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -1
Query: 242 LQYYSHCDSVDLSNQQLTSNIFPSLIVLQHCKKLSLENNNLTTMK 108
LQ+Y +S+DLS+ + S I S K L+L NN +TT++
Sbjct: 140 LQFYPALESLDLSSN-IISEIKTSSFPRMQLKYLNLSNNRITTLE 183
>BC117368-1|AAI17369.1| 1065|Homo sapiens leucine-rich repeats and
immunoglobulin-like domains 2 protein.
Length = 1065
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -1
Query: 242 LQYYSHCDSVDLSNQQLTSNIFPSLIVLQHCKKLSLENNNLTTMK 108
LQ+Y +S+DLS+ + S I S K L+L NN +TT++
Sbjct: 140 LQFYPALESLDLSSN-IISEIKTSSFPRMQLKYLNLSNNRITTLE 183
>AL357055-1|CAH73254.1| 1065|Homo sapiens leucine-rich repeats and
immunoglobulin-like domains 2 protein.
Length = 1065
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -1
Query: 242 LQYYSHCDSVDLSNQQLTSNIFPSLIVLQHCKKLSLENNNLTTMK 108
LQ+Y +S+DLS+ + S I S K L+L NN +TT++
Sbjct: 140 LQFYPALESLDLSSN-IISEIKTSSFPRMQLKYLNLSNNRITTLE 183
>AB018349-1|BAA34526.2| 1073|Homo sapiens KIAA0806 protein protein.
Length = 1073
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -1
Query: 242 LQYYSHCDSVDLSNQQLTSNIFPSLIVLQHCKKLSLENNNLTTMK 108
LQ+Y +S+DLS+ + S I S K L+L NN +TT++
Sbjct: 148 LQFYPALESLDLSSN-IISEIKTSSFPRMQLKYLNLSNNRITTLE 191
>BC018739-1|AAH18739.1| 1050|Homo sapiens BUB1 budding uninhibited
by benzimidazoles 1 homolog beta (yeast) protein.
Length = 1050
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 605 CKEMVYIGKNEIKFERNYSEAVIEELKDQLES 510
CKE +Y G E FE +E ++LK+Q E+
Sbjct: 399 CKEKIYAGVGEFSFEEIRAEVFRKKLKEQREA 430
>AF310214-1|AAL10712.1| 1050|Homo sapiens budding uninhibited by
benzimidazoles 1 beta protein.
Length = 1050
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 605 CKEMVYIGKNEIKFERNYSEAVIEELKDQLES 510
CKE +Y G E FE +E ++LK+Q E+
Sbjct: 399 CKEKIYAGVGEFSFEEIRAEVFRKKLKEQREA 430
>AF107297-1|AAD11941.1| 1050|Homo sapiens mitotic checkpoint protein
kinase BUB1B protein.
Length = 1050
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 605 CKEMVYIGKNEIKFERNYSEAVIEELKDQLES 510
CKE +Y G E FE +E ++LK+Q E+
Sbjct: 399 CKEKIYAGVGEFSFEEIRAEVFRKKLKEQREA 430
>AF068760-1|AAC19118.1| 1050|Homo sapiens MAD3-like protein kinase
protein.
Length = 1050
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 605 CKEMVYIGKNEIKFERNYSEAVIEELKDQLES 510
CKE +Y G E FE +E ++LK+Q E+
Sbjct: 399 CKEKIYAGVGEFSFEEIRAEVFRKKLKEQREA 430
>AF053306-1|AAC06260.1| 1050|Homo sapiens mitotic checkpoint kinase
Mad3L protein.
Length = 1050
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 605 CKEMVYIGKNEIKFERNYSEAVIEELKDQLES 510
CKE +Y G E FE +E ++LK+Q E+
Sbjct: 399 CKEKIYAGVGEFSFEEIRAEVFRKKLKEQREA 430
>AF046918-1|AAC33435.1| 1050|Homo sapiens mitotic checkpoint protein
kinase Bub1A protein.
Length = 1050
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 605 CKEMVYIGKNEIKFERNYSEAVIEELKDQLES 510
CKE +Y G E FE +E ++LK+Q E+
Sbjct: 399 CKEKIYAGVGEFSFEEIRAEVFRKKLKEQREA 430
>AF046079-1|AAC12730.2| 1050|Homo sapiens BUBR1 protein.
Length = 1050
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 605 CKEMVYIGKNEIKFERNYSEAVIEELKDQLES 510
CKE +Y G E FE +E ++LK+Q E+
Sbjct: 399 CKEKIYAGVGEFSFEEIRAEVFRKKLKEQREA 430
>AF035933-1|AAC23736.1| 1050|Homo sapiens protein kinase protein.
Length = 1050
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 605 CKEMVYIGKNEIKFERNYSEAVIEELKDQLES 510
CKE +Y G E FE +E ++LK+Q E+
Sbjct: 399 CKEKIYAGVGEFSFEEIRAEVFRKKLKEQREA 430
>AB208782-1|BAD92019.1| 1091|Homo sapiens Mitotic checkpoint
serine/threonine-protein kinase BUB1 beta variant
protein.
Length = 1091
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 605 CKEMVYIGKNEIKFERNYSEAVIEELKDQLES 510
CKE +Y G E FE +E ++LK+Q E+
Sbjct: 440 CKEKIYAGVGEFSFEEIRAEVFRKKLKEQREA 471
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,609,466
Number of Sequences: 237096
Number of extensions: 1409579
Number of successful extensions: 2711
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2711
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -