Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_N09
(629 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF100664-1|AAC68985.1| 580|Caenorhabditis elegans Hypothetical ... 48 4e-06
U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z72508-6|CAA96643.1| 415|Caenorhabditis elegans Hypothetical pr... 30 1.2
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 29 2.1
U64852-1|AAB04966.2| 1041|Caenorhabditis elegans Uncoordinated p... 29 2.7
AF338767-1|AAL15621.1| 1041|Caenorhabditis elegans UNC-83 protein. 29 2.7
U80029-19|AAB37598.1| 139|Caenorhabditis elegans Hypothetical p... 29 3.6
Z82274-9|CAB05232.2| 260|Caenorhabditis elegans Hypothetical pr... 28 4.8
AC024809-3|AAF59541.3| 455|Caenorhabditis elegans Hypothetical ... 28 4.8
Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL021473-1|CAA16305.1| 570|Caenorhabditis elegans Hypothetical ... 28 6.3
>AF100664-1|AAC68985.1| 580|Caenorhabditis elegans Hypothetical
protein M57.2 protein.
Length = 580
Score = 48.4 bits (110), Expect = 4e-06
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 7/181 (3%)
Frame = -1
Query: 620 IQGVECKEMVYIGKNEIKFERNYSEAVIEE-LKDQLESCRQLLNLEPDSKWTM-LTTTIF 447
I E E Y+ + +K + E + + LE C+QL+ LEP +KW + + T +
Sbjct: 342 ISWTELNEQPYVNLDRLKTIYDVVEVPQPAYIGELLEDCKQLIELEPKNKWPLYMRTLVL 401
Query: 446 LHCIDAKAYHTESIQNLQKL-KVIDKLRAGYYDDLIAKWCIEKQLCSDYE---NADLALK 279
L K+Y E I+NL+ L + +D R+ Y LI++ + + +E D
Sbjct: 402 LEYQPIKSYE-EIIKNLENLSENLDPKRSELYKSLISRQNLNFSIREQFERILGPDTDWL 460
Query: 278 FSFPSPVSSLPYLQYYS-HCDSVDLSNQQLTSNIFPSLIVLQHCKKLSLENNNLTTMKNF 102
S ++SL ++Y + S D S +L IVL + K L++ N + ++
Sbjct: 461 TCRYSKLTSLEGVEYLAGFVGSADFSGNRLKE---IQRIVLPNLKSLTINENPIESLPPS 517
Query: 101 P 99
P
Sbjct: 518 P 518
>U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical
protein F02E8.5 protein.
Length = 578
Score = 31.1 bits (67), Expect = 0.68
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Frame = -1
Query: 539 IEELKDQLESCRQLLNLEPDSKWTM-LTTTIFLHCIDAKAYHTES-IQNLQKLKVIDKLR 366
I L + C L++ D+ + L T +HC A+ Y T S + + + +
Sbjct: 464 ITSLDVTMSGCELLVSTRDDTISLIDLRTFQTVHCYSAENYRTSSDLSRVVLSSGNEYVA 523
Query: 365 AGYYDDLIAKWC-----IEKQLCSDYENADLALKFS 273
AG + I W +EKQLCS+ ENA +L ++
Sbjct: 524 AGSSNGSIFVWNRNSTKLEKQLCSNSENAIFSLSWN 559
>Z72508-6|CAA96643.1| 415|Caenorhabditis elegans Hypothetical
protein F28H7.7 protein.
Length = 415
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = -1
Query: 536 EELKDQLESCRQLLNLEPDSKWTMLTTTIFLHCIDAKAYHTESIQNLQKL 387
E+L ++ + Q++ P KW LTT +L+C D K ++ I N QK+
Sbjct: 288 EKLPEKFINPVQIMQEMPSRKWE-LTTQPWLNCTDGKHCFSKMIVNNQKV 336
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
protein C56E6.6 protein.
Length = 1102
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 221 DSVDLSNQQLTSNIFPSLIVLQHCKKLSLENNNLTTMKNF 102
+S+ L N QL FPSL L + L L+NN + + NF
Sbjct: 371 ESLFLQNNQLAH--FPSLFRLDKLRHLMLDNNQIQKIDNF 408
>U64852-1|AAB04966.2| 1041|Caenorhabditis elegans Uncoordinated
protein 83, isoform a protein.
Length = 1041
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 548 EAVIEELKDQLESCRQLLNLEPDSKWTMLTTTIFLHCID 432
E+ EE+ LE+C L NL DS + + TI C+D
Sbjct: 27 ESSAEEVDIFLENCSSLYNLILDSLHNLTSKTISCECLD 65
>AF338767-1|AAL15621.1| 1041|Caenorhabditis elegans UNC-83 protein.
Length = 1041
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 548 EAVIEELKDQLESCRQLLNLEPDSKWTMLTTTIFLHCID 432
E+ EE+ LE+C L NL DS + + TI C+D
Sbjct: 27 ESSAEEVDIFLENCSSLYNLILDSLHNLTSKTISCECLD 65
>U80029-19|AAB37598.1| 139|Caenorhabditis elegans Hypothetical
protein T20D4.19 protein.
Length = 139
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 620 IQGVECKEMVYIGKNEIKFERNYSEAVIEELKDQLESCRQLLN 492
++ ++C K +K +NY EAV+ + KD E +L N
Sbjct: 82 LETIQCGLETQSDKKNVKMIKNYCEAVVYDSKDFAECSEKLEN 124
>Z82274-9|CAB05232.2| 260|Caenorhabditis elegans Hypothetical
protein JC8.5 protein.
Length = 260
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -1
Query: 368 RAGYYDDLIAKWCIEKQLCSDYENADLALKFSFPSPVSSLPYLQYYSHCDSVDLS 204
+A YY + I +C E+Q+ + E DL + F + P L+Y DS+ LS
Sbjct: 173 QAAYYFNKIQCFCFEEQILNPGEQVDLPVFFYIDPDYVNDPALEY---LDSILLS 224
>AC024809-3|AAF59541.3| 455|Caenorhabditis elegans Hypothetical
protein Y53G8AR.8 protein.
Length = 455
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = -1
Query: 452 IFLHCIDAKAYHT-----ESIQNLQKLKVIDKLRAGYYDDLIAKWCI 327
+F+ IDA E+++NLQKL+++ + Y DD WCI
Sbjct: 175 LFIEAIDASGTQIMFEGLENLENLQKLRLLRLANSEYVDD----WCI 217
>Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical
protein C09F9.3 protein.
Length = 800
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 478 LSGSKFNSCLQDSSWSFNSSITASE 552
L SK N CLQ S +FN +I ASE
Sbjct: 216 LGDSKKNFCLQSVSKAFNYAIVASE 240
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical
protein F43C1.1 protein.
Length = 1036
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -1
Query: 257 SSLPYLQYYSHCDSVDLSNQQLTSNIFPSLIVLQHCKKLSLENNNLTTM 111
+S+P + H +DLS+ +L S +L L+ + L+L +N LT +
Sbjct: 525 NSVPVIVNMKHLKIIDLSHNRLNSFDDSALSSLELLEDLNLSSNRLTRL 573
>AL021473-1|CAA16305.1| 570|Caenorhabditis elegans Hypothetical
protein Y20C6A.2 protein.
Length = 570
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = -1
Query: 419 HTE-SIQNL--QKLKVIDKLRAGYYDDLIAKWCIEKQLCSDYENADLALKFSFPSPVSSL 249
HT QNL QK K + +DL+ + D+E +L LKF + L
Sbjct: 164 HTACEFQNLACQKFKQFHSSKKCTLNDLLVMEAKDFVSSIDFEELNLFLKFWIKGFIQHL 223
Query: 248 PYLQYYSHCDSVDLSN 201
++ Y D+ DL N
Sbjct: 224 KCVELYVESDTSDLQN 239
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,750,347
Number of Sequences: 27780
Number of extensions: 248115
Number of successful extensions: 746
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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