Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_N06
         (523 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024817-2|AAU87810.1|  520|Caenorhabditis elegans Hypothetical ...    28   4.7  
AF036693-1|AAK29785.1|  391|Caenorhabditis elegans Hypothetical ...    27   8.1  

>AC024817-2|AAU87810.1|  520|Caenorhabditis elegans Hypothetical
           protein Y54G2A.38 protein.
          Length = 520

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 18  LFTLIYTVQS*SVFFY*LNEHVWMYLSIFLI 110
           + TL+   ++ S+FFY +NE +W +L  F I
Sbjct: 337 MVTLMSLNRTTSIFFYFVNEKIWKFLFPFSI 367


>AF036693-1|AAK29785.1|  391|Caenorhabditis elegans Hypothetical
           protein C49A9.7 protein.
          Length = 391

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
 Frame = +1

Query: 1   FIYIKIY-LHLS-TQFNPKAYFFIN 69
           +IYI IY L +S T FNP  Y+F+N
Sbjct: 321 YIYINIYWLGMSSTVFNPVIYYFMN 345


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,622,189
Number of Sequences: 27780
Number of extensions: 191814
Number of successful extensions: 448
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)