Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_N05
(766 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0180 + 15502809-15503312,15503399-15503454,15503934-155040... 119 3e-27
03_02_0926 + 12448032-12448231,12448727-12448815,12449956-124500... 106 2e-23
03_01_0359 - 2805094-2805175,2805256-2805347,2805443-2805517,280... 87 2e-17
03_02_0651 + 10183050-10184167,10184350-10184974,10185023-101852... 43 3e-04
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 31 0.76
11_04_0168 + 14391244-14391325,14392132-14392155,14392256-143923... 31 1.3
06_01_0931 + 7192519-7194075 31 1.3
05_01_0192 + 1394342-1396645 30 1.8
07_03_1107 - 24024387-24024497,24025799-24026410 29 4.1
11_03_0035 - 9130678-9130887,9130963-9131255,9132328-9132604 29 5.4
08_02_1457 + 27260841-27260965,27261126-27261246,27263455-272635... 29 5.4
11_06_0284 + 21909758-21913645 28 7.1
06_03_1403 + 29923503-29923821,29924269-29924405,29924495-299246... 28 7.1
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 28 7.1
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 28 7.1
01_01_0895 + 7052118-7053110,7053249-7053252,7054450-7055189 28 7.1
11_06_0185 + 21018045-21022307 28 9.4
09_02_0475 + 9724676-9724936,9725518-9726216,9726273-9726596,972... 28 9.4
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184... 28 9.4
>10_08_0180 +
15502809-15503312,15503399-15503454,15503934-15504053,
15504190-15504260,15504603-15504696,15504772-15504978,
15505406-15505657,15505781-15505889,15506112-15506179,
15506278-15506347,15506429-15506503,15506600-15506691,
15506779-15506860
Length = 599
Score = 119 bits (286), Expect = 3e-27
Identities = 59/137 (43%), Positives = 81/137 (59%), Gaps = 7/137 (5%)
Frame = -3
Query: 500 IHRAAGPFLQAECDSIGGCPTGDAKVTGGYNLPAKYIIHTVGPQ------DGSAEKLESC 339
+H AAG L EC ++GGC TG AK+T Y+LPA+ +IHTVGP+ + L C
Sbjct: 153 LHAAAGSGLAEECSTLGGCRTGMAKMTNAYDLPARKVIHTVGPKYAVKYHTAAENALSHC 212
Query: 338 YEKCLSFQQEYQIKSIAFPCISTGIYGFPNRLAAHIALRTARKFLE-TNTEMNRIIFCTF 162
Y CL E ++SIA CI T +P AAH+A+RT R+FLE +++ ++FCT
Sbjct: 213 YRSCLELLIENGLESIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKSKIAGVVFCTV 272
Query: 161 LPIDVEIYETLMQLYLP 111
D EIY+ L+ LY P
Sbjct: 273 SSSDTEIYKRLLPLYFP 289
>03_02_0926 +
12448032-12448231,12448727-12448815,12449956-12450096,
12450181-12450283,12450386-12450481,12450580-12450654,
12450754-12450823,12451028-12451111
Length = 285
Score = 106 bits (255), Expect = 2e-23
Identities = 63/158 (39%), Positives = 90/158 (56%), Gaps = 10/158 (6%)
Frame = -3
Query: 614 SISERVSIFKGDITKLEIDAIVNAANSRLKAGGGVDGAIHRAAGPFLQAECDSI----GG 447
S S+ +S+ +T + I VNAAN R+ GGGVDGAIHR AGP L C + G
Sbjct: 108 SNSDYLSMTMKKMTVIHISQ-VNAANERMLGGGGVDGAIHRTAGPELVEACRKVPEVKSG 166
Query: 446 --CPTGDAKVTGGYNLPAKYIIHTVGP---QDGSAE-KLESCYEKCLSFQQEYQIKSIAF 285
CPTG+A++T + LP +IHTVGP D E L + Y L ++ I+ IA
Sbjct: 167 VRCPTGEARITPAFKLPVSRVIHTVGPIYDMDKQPEVSLNNAYTNSLKLAKQNGIQYIAL 226
Query: 284 PCISTGIYGFPNRLAAHIALRTARKFLETNTEMNRIIF 171
P IS G+Y +P + A+ IA+ TA++F E++ ++F
Sbjct: 227 PAISCGVYRYPPKEASKIAVSTAQRFSNDIKEVHFVLF 264
>03_01_0359 -
2805094-2805175,2805256-2805347,2805443-2805517,
2805582-2805675,2805769-2805872,2806777-2806885,
2807397-2807609,2808170-2808289,2809060-2809115,
2809210-2809287,2809374-2809733
Length = 460
Score = 86.6 bits (205), Expect = 2e-17
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 6/102 (5%)
Frame = -3
Query: 611 ISERVSIFKGDITKLEIDAIVNAANSRLKAGGGVDGAIHRAAGPFLQAECDSIGGCPTGD 432
I+ ++ +++G LE+DA+VN+ N L G +H AAGP L EC ++GGC TG
Sbjct: 95 INSKICLWRGHPWNLEVDAVVNSTNENLDEAHSSPG-LHAAAGPGLAEECTTLGGCRTGM 153
Query: 431 AKVTGGYNLPAKYIIHTVGPQ------DGSAEKLESCYEKCL 324
AK+T Y+LPA+ +IHTVGP+ + L CY CL
Sbjct: 154 AKMTNAYDLPARKVIHTVGPKYAVKYHTAAENALSHCYRSCL 195
>03_02_0651 +
10183050-10184167,10184350-10184974,10185023-10185208,
10185325-10185660
Length = 754
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Frame = -3
Query: 641 IKINTEKNKSISERVSIFKGDITKLE------IDAIVNAANSRLK-AGGGVDGAIHRAAG 483
+K K S R F GDIT+L+ + I NAAN RLK GGGV+ AI+ AAG
Sbjct: 332 VKEKAAKKNINSSRFFTFVGDITQLQSKGGLRCNVIANAANWRLKPGGGGVNAAIYNAAG 391
Query: 482 PFLQ 471
LQ
Sbjct: 392 EDLQ 395
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 31.5 bits (68), Expect = 0.76
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Frame = +1
Query: 415 PPVTLASPVGHPPIESHSACKKGPAARCMAPSTP---PPAFSLELAAFTI--ASISSLVM 579
PP P HPP H + P AP P PP + FT A++S +M
Sbjct: 227 PPSPHRHPAAHPPPPPHHPAPRPPPPMAAAPRQPAALPPVPGATVVPFTTMQAAVSRNMM 286
Query: 580 SPLKIET 600
L + T
Sbjct: 287 ESLSVPT 293
>11_04_0168 +
14391244-14391325,14392132-14392155,14392256-14392381,
14392491-14392832,14392955-14393070,14393166-14393426,
14393875-14394072,14394177-14394254
Length = 408
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = -3
Query: 683 SKKSTTDDLKEFEKIKINTEKNKSISERVSIFKG--DITKLEIDAIVNAANSRLKAGGGV 510
SKKS D+ + + +++ NK E ++ + G +K EI+ +N ANS++ G G
Sbjct: 61 SKKSKADETIDSTR---SSQDNKVHGEVINRWSGLYKFSKGEIEKAINYANSKICLGSGS 117
Query: 509 DGAIHRAAGP 480
G +++ P
Sbjct: 118 AGQVYQGVLP 127
>06_01_0931 + 7192519-7194075
Length = 518
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 346 SSFSADPSWGPTVWMIYLAGKL*PPVTLASPVGHPPIESHS-ACKKGPAARCMAPSTPPP 522
SSF+ADP P ++ ++G L +A PV PP ++ AC + C A + PP
Sbjct: 25 SSFTADP---PAEFLCPISGTL-----MADPVVVPPGQTFERACIQA----CAALAFSPP 72
Query: 523 AFSLELAAFTIASISSLVMSP 585
A + +L++ ++ S LV+ P
Sbjct: 73 AVAADLSSLPPSASSPLVLVP 93
>05_01_0192 + 1394342-1396645
Length = 767
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 451 PIESHSACKKGPAARCMAPSTPPPAFSLELAAFTIASISSLVMSP 585
P S S+ K P+ R PS+PPP + AA AS++ ++ SP
Sbjct: 247 PTSSSSSPSK-PSPRMATPSSPPPEAPVSSAAPPPASLNPMLPSP 290
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +1
Query: 424 TLASPVGHPPIESHSACKKGPAARCMAPSTPPPAFSLELAAFTIASISSLVMSPLKIETR 603
T +P PP +S A P A A +TPPPA S + A + S +P I T+
Sbjct: 79 TTPAPTKAPPTKSTKAPAPAPKA---AKATPPPASSPPVEAPVASPPSPAAEAPATIPTK 135
Query: 604 SE 609
+
Sbjct: 136 PD 137
>11_03_0035 - 9130678-9130887,9130963-9131255,9132328-9132604
Length = 259
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 448 PPIESHSACKKGPAARCMAPSTPPPAFSLELA 543
PP + HS KG AP+ PP LEL+
Sbjct: 139 PPFKKHSIFFKGLFGTAPAPAPAPPLLELELS 170
>08_02_1457 + 27260841-27260965,27261126-27261246,27263455-27263543,
27263776-27263860,27263970-27264074,27264446-27264527,
27264573-27264686,27265029-27265330,27265519-27266114,
27266216-27266376,27266489-27266592,27266697-27266856,
27266942-27267105,27267213-27267545,27267640-27267930,
27268276-27268359,27268430-27268563,27268665-27268892,
27268993-27269164,27269263-27269517,27269778-27270047
Length = 1324
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3
Query: 242 AAHIALRTARKFLETNTEMNRIIFCTFLPIDVEIYETLMQLYL 114
AA I +RT RK ++T R + CT +EI+E+ +L L
Sbjct: 909 AAAIVMRTVRKTVDTG----RTVVCTIHQPSIEIFESFDELLL 947
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 734 ENVDPWSKYLNKSQGIDSKKSTTDDLK-EFEKIKINTEKNKSISE-RVSIFKGDITKL 567
E+ DPW Y+ K SKK +K + EK+KI + K S+ + KGD T L
Sbjct: 295 EDPDPWKDYVKKCGNHRSKKRMLRKIKRKIEKMKIYEKFEKIKSDIQDGQQKGDKTLL 352
>06_03_1403 +
29923503-29923821,29924269-29924405,29924495-29924647,
29924690-29925280,29925523-29925597,29925901-29926169,
29927238-29927331
Length = 545
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = -3
Query: 758 KSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFK-- 585
K D IDLE +D +SK N+ K EKI+ + + E++ K
Sbjct: 309 KEVDHIDLEELDKFSKLQNEQNANRLKVLEIQQKLSSEKIEQTKISHLAAKEQMEAAKVQ 368
Query: 584 GDITKLEIDAIVNAANSRL 528
+ KLE++A + +RL
Sbjct: 369 REARKLEVEARMYETYNRL 387
>03_05_0432 -
24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = -3
Query: 740 DLENVDPWSKYLNKSQGIDSKKSTTD--DLKEFEK-IKINTEKNKSISERVSIFKGDITK 570
+++N D +L+ DSKK D D + +K ++ +E+NK + R+S K
Sbjct: 91 EMDNPDMAPYFLSFINASDSKKQAKDNQDNERLQKELESLSEENKDLKSRISSLLEQTNK 150
Query: 569 LEIDAI 552
E++ +
Sbjct: 151 AELEVV 156
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = -3
Query: 254 PNRLAAHIALRTARKFLETNTEMNRIIFCTFLPIDVEIYETLMQLYLPTL*FLTRVSKTX 75
P L I +K + + + I+FCT + + E L QL L +R S++
Sbjct: 319 PLDLHFSILYNVLKKHIAEDADYKVIVFCTTAMVTKLVAEVLSQLKLNIREIHSRKSQSA 378
Query: 74 NKQIKDQF 51
++ D+F
Sbjct: 379 RTKVSDEF 386
>01_01_0895 + 7052118-7053110,7053249-7053252,7054450-7055189
Length = 578
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = -3
Query: 722 PWSKYLNKSQGIDSKKSTT----DDLKEFEKIKINTEKNKSISERVSIFKGDITKLE-ID 558
PW +++K G+D+K + T D L E I + E+ +S + V + D + +D
Sbjct: 242 PWLAWVDKLTGLDAKVARTSAAMDGLLE-RVIADHRERRRSRGQAVGDGEADADHRDFVD 300
Query: 557 AIVNAANSRLKAGGGVDGAI 498
+++ + + AG G G +
Sbjct: 301 VMLDVSEAEEGAGAGAGGVL 320
>11_06_0185 + 21018045-21022307
Length = 1420
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = -3
Query: 734 ENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDI 576
E+ DPW Y K SKK D KIK N +K +I E++ K DI
Sbjct: 300 EDPDPWQDYYKKCGIYRSKKGVLD------KIKRNIKK-MNIYEKLDKIKSDI 345
>09_02_0475 +
9724676-9724936,9725518-9726216,9726273-9726596,
9726900-9727847
Length = 743
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 181 LFISVLVSRNFLAVRSAMCAARRFGK--P*IPVDIHGKAIDFIWYSCWND 324
+FI LVSR+FL + + + K P + +HG DF+ Y +D
Sbjct: 410 MFIEALVSRSFLQIVNTSLVTEKKCKNPPPTILKVHGLVYDFLRYIAADD 459
>04_01_0162 +
1845295-1846317,1846430-1846565,1848436-1848626,
1848780-1848887,1849001-1849204,1849294-1849525,
1849602-1849751,1849830-1850007,1850416-1850519,
1850611-1850933,1851274-1851459,1851672-1851899
Length = 1020
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/62 (25%), Positives = 25/62 (40%)
Frame = +1
Query: 418 PVTLASPVGHPPIESHSACKKGPAARCMAPSTPPPAFSLELAAFTIASISSLVMSPLKIE 597
P A P P + +GP A P PPP+ A +A S+ V P ++
Sbjct: 145 PFGTAPPPSQGPFAASVPPSQGPFASAQPPFRPPPSLVQSPTASGMAPPSAYVRPPPPVQ 204
Query: 598 TR 603
++
Sbjct: 205 SQ 206
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,629,194
Number of Sequences: 37544
Number of extensions: 392632
Number of successful extensions: 1527
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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