Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_N04
         (670 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81117-12|CAB03320.2|  345|Caenorhabditis elegans Hypothetical p...    32   0.42 
Z70311-2|CAA94374.1|  366|Caenorhabditis elegans Hypothetical pr...    31   0.74 
AL034365-4|CAA22262.1|  375|Caenorhabditis elegans Hypothetical ...    31   0.74 

>Z81117-12|CAB03320.2|  345|Caenorhabditis elegans Hypothetical
           protein T06E6.5 protein.
          Length = 345

 Score = 31.9 bits (69), Expect = 0.42
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -2

Query: 201 SLVSFSLIHMLNFSENQCFKHNVNPLMFCSILNFTLLVHGSCNSKILDFRVYSLT 37
           SL+S  L+   +FSEN    +N  PL++    N        CN  + + +VY  T
Sbjct: 112 SLISIDLLEGADFSENSDRDNNNRPLLYPRFFNKISKPLKLCNPNVCEIKVYFST 166


>Z70311-2|CAA94374.1|  366|Caenorhabditis elegans Hypothetical
           protein T25B9.2 protein.
          Length = 366

 Score = 31.1 bits (67), Expect = 0.74
 Identities = 11/39 (28%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 153 QCFKHNVNPLMFCSILNFTLL-VHGSCNSKILDFRVYSL 40
           +CF++  N   FC+++N T++ +HG  +  +  F  +S+
Sbjct: 178 ECFQNMFNVFPFCAVINNTIMCMHGGISEHLTSFNQFSV 216


>AL034365-4|CAA22262.1|  375|Caenorhabditis elegans Hypothetical
           protein Y69E1A.4 protein.
          Length = 375

 Score = 31.1 bits (67), Expect = 0.74
 Identities = 11/39 (28%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 153 QCFKHNVNPLMFCSILNFTLL-VHGSCNSKILDFRVYSL 40
           +CF++  N   FC+++N T++ +HG  +  +  F  +S+
Sbjct: 210 ECFQNMFNVFPFCAVINNTIMCMHGGISEHLTSFNQFSV 248


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,280,370
Number of Sequences: 27780
Number of extensions: 248757
Number of successful extensions: 494
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 494
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)