Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_N01
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   2.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.1  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   6.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.7  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   8.9  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.9  

>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 472 TTLYPGKQYRVSFFPN*NFNGDEKAFLQQSKSVE 573
           ++L  GK+ + S  PN + NGD      Q++S+E
Sbjct: 69  SSLTEGKRSKRSKRPNGDTNGDTSQVDDQNESLE 102


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 440 LNVCYTTVYYKQLFTPENSIVFHSFR 517
           LN C   VYY+ L     +I+  SF+
Sbjct: 172 LNSCLMDVYYEFLLISLINILIRSFK 197


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 203 LVQNSTFRLDY*KKTIVDLIFVLNFLHK 286
           L  N + +  + K+  VD + +LN +HK
Sbjct: 79  LTNNISDKHGFLKEKAVDFLTILNSMHK 106


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 158 SYVCTCKX*F 129
           SY+CTCK  F
Sbjct: 44  SYICTCKPGF 53


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 479 FTPENSIVFHSFRIKILTEMKKRF 550
           F   N++V     ++++ EMKKR+
Sbjct: 345 FVCVNTLVSEQEGLQLINEMKKRY 368


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 419 YIMNLACLNVCYTTV 463
           +I+  AC+++ YT V
Sbjct: 169 FILAFACISIAYTNV 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,173
Number of Sequences: 336
Number of extensions: 3573
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)