Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_N01
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0279 + 16211180-16211410,16211516-16211659,16212466-162125...    28   5.6  
02_02_0577 - 11736474-11736609,11736756-11737003,11738002-117380...    28   5.6  

>07_03_0279 +
           16211180-16211410,16211516-16211659,16212466-16212597,
           16213478-16213591
          Length = 206

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -3

Query: 225 RNVLFCTNEFCFKINKLLCFAAELRVYM*XLIYI 124
           R+V+  T EF  K  K LC+++   +Y+  ++YI
Sbjct: 139 RSVVVTTVEFRLKDTKKLCYSSRATIYIMPVLYI 172


>02_02_0577 -
           11736474-11736609,11736756-11737003,11738002-11738087,
           11738557-11738633,11738813-11738846,11739922-11740037,
           11740121-11740659
          Length = 411

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 48  LINLXPTSQLQRYYSLCFRIAIHCMKYKLXFTCTHVAQL 164
           L+ L PT    +  S CF +A HC+ +++      V QL
Sbjct: 230 LLTLWPTGDFGKILS-CFTMAFHCLAHEIVSASCMVVQL 267


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,376,622
Number of Sequences: 37544
Number of extensions: 255643
Number of successful extensions: 389
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 389
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)