Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_N01
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    27   0.68 
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   4.8  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   8.4  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    23   8.4  

>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
 Frame = +2

Query: 68  ITVTTXL*FMLPYCYSLYEI*IXFYMYTRSSAAK-----QSNLFILKQNSLVQN 214
           +T+T  + F+  +C++ Y +   +YM+ R SAAK     Q  LF++  ++   N
Sbjct: 308 LTITIVVVFV--WCWTPYVVMTLWYMFDRESAAKVDVAVQDGLFLMAVSNSCMN 359


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 455 TTVYYKQLFTPENSIVFHSFRIKILTEMKK 544
           TT+Y+K+LF      + H  R+    ++ K
Sbjct: 226 TTLYHKELFAAALDRILHEMRVDTPDDLVK 255


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 362 LDPII*ENVYFIPNKFVFF*IMNLLI 285
           L PII +  YF+PN+  F  I  +L+
Sbjct: 311 LPPIILDAGYFMPNRMFFDNIGTILL 336


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +3

Query: 87  YSLCFRIAIHCMKYKLXFTCTHVAQLQNKAI 179
           +++CF I   CM  +    C +V+    K +
Sbjct: 539 FAICFNILNWCMLVRSSNVCPYVSSTMEKTL 569


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,548
Number of Sequences: 2352
Number of extensions: 13216
Number of successful extensions: 59
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)