Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_M24
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0BG14 Cluster: Chromosome undetermined scaffold_105, w...    38   0.31 
UniRef50_Q7RQI0 Cluster: Putative uncharacterized protein PY0111...    34   2.9  
UniRef50_Q7RT45 Cluster: Asparagine-rich protein; n=6; Plasmodiu...    33   6.7  

>UniRef50_A0BG14 Cluster: Chromosome undetermined scaffold_105,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_105,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 526

 Score = 37.5 bits (83), Expect = 0.31
 Identities = 20/49 (40%), Positives = 30/49 (61%)
 Frame = -1

Query: 620 DDKFIINYIGIFLFLSCYSARSTILLFVWSILLNIAMLIKSRFRIFFGL 474
           D K   NYI + ++LS Y + S +L   +++  NI ++ KSRFRI  GL
Sbjct: 259 DSKVEKNYISMTIYLSLYCS-SFLLTISFTLPCNIYLMTKSRFRILLGL 306


>UniRef50_Q7RQI0 Cluster: Putative uncharacterized protein PY01117;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY01117 - Plasmodium yoelii
           yoelii
          Length = 447

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +2

Query: 359 FVFFLIIKVILQID*SALFIHNVVRKRRTFFVLYKVQITNQR 484
           FVFF  +K+I  I+ S   +   + KR   ++LY V I NQ+
Sbjct: 10  FVFFEFVKIINNINNSNKLLFQKINKRNQQYLLYNVNIPNQK 51


>UniRef50_Q7RT45 Cluster: Asparagine-rich protein; n=6; Plasmodium
           (Vinckeia)|Rep: Asparagine-rich protein - Plasmodium
           yoelii yoelii
          Length = 1088

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = -2

Query: 502 NRGLEFSLVCDLYFI---QYKKSSSFPNDIMYKKRRSVDLQDYFNN*KKNESTCFT 344
           N  + F ++C LYF+    Y    + PN  +     S DL D F+N +KN    F+
Sbjct: 395 NVKINFEIICFLYFLLICNYLSRDNKPNKELDSHNNSFDLIDIFSNIEKNSEYYFS 450


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,179,704
Number of Sequences: 1657284
Number of extensions: 9061302
Number of successful extensions: 18644
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18634
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)