Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_M22
         (469 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0638 - 4819365-4819685,4819702-4819882,4820018-4820073,482...    33   0.15 
01_07_0227 + 42144437-42144446,42145059-42145428,42145528-421456...    30   1.1  
06_01_1107 + 9120664-9120793,9120882-9121615,9121694-9123069,912...    28   3.3  
04_01_0048 + 522423-522552,522641-523374,523453-524828,528100-52...    28   4.3  
01_03_0278 - 14509481-14509506,14510700-14512291,14512547-145126...    28   4.3  
05_04_0395 - 20921606-20921869,20921971-20922112,20922206-209223...    27   7.5  
03_03_0060 - 14157352-14158851                                         27   7.5  

>01_01_0638 -
           4819365-4819685,4819702-4819882,4820018-4820073,
           4820107-4820148,4820484-4820639,4820681-4820809,
           4821072-4821254,4821374-4821524,4821670-4821848
          Length = 465

 Score = 32.7 bits (71), Expect = 0.15
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = -2

Query: 453 ADEIHALFVTNMSLKTLVFCVCVTLASAAIQRSALE 346
           A+++H +   +M LK L+FC+C+ L S  I  ++LE
Sbjct: 332 AEKLHQILEVSMLLKKLIFCMCI-LCSDMITHTSLE 366


>01_07_0227 +
           42144437-42144446,42145059-42145428,42145528-42145649,
           42145767-42145935,42146236-42146545,42146742-42146825,
           42147012-42147083,42147780-42147821,42147931-42148020,
           42148106-42148213,42148292-42148384,42148540-42148619,
           42148701-42148953,42151222-42151236
          Length = 605

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 312 CYIREFDGVLPFDSVTYSKEAECTRYFCAH 223
           C I+  + +L   +   SK A+C RYFC H
Sbjct: 182 CLIKMLEEILERAAEISSKLAQCDRYFCGH 211


>06_01_1107 +
           9120664-9120793,9120882-9121615,9121694-9123069,
           9123152-9123322,9123402-9123702
          Length = 903

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 16/60 (26%), Positives = 25/60 (41%)
 Frame = +2

Query: 116 VQRMQIVSRFSSVLVKVHTGVSVLSSSLHDWCMTASCAQKYRVHSASFEYVTESKGRTPS 295
           V  ++++    S+  K H  + +L+S+ H     A C    RVH      V E     PS
Sbjct: 438 VDHIEVIVVIQSISNKRHLHIPILNSNFHLMQGAAQCVLLARVHPTFAPEVAEGMAFKPS 497


>04_01_0048 +
           522423-522552,522641-523374,523453-524828,528100-528400
          Length = 846

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 16/60 (26%), Positives = 25/60 (41%)
 Frame = +2

Query: 116 VQRMQIVSRFSSVLVKVHTGVSVLSSSLHDWCMTASCAQKYRVHSASFEYVTESKGRTPS 295
           V  ++++    S+  K H  + +L+S+ H     A C    RVH      V E     PS
Sbjct: 438 VDHIEVIVVIRSISNKRHLHIPILNSNFHLMQGAAQCVLLARVHPTFAPEVAEGMAFKPS 497


>01_03_0278 - 14509481-14509506,14510700-14512291,14512547-14512638,
            14513030-14514412
          Length = 1030

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -2

Query: 417  SLKTLVFCVCVTLASAAIQRSALEPIPDKFSGLQGCYIRE 298
            SL  L  C C +LAS+++  S     P  +S LQG  I E
Sbjct: 960  SLVKLTLCYCKSLASSSLPNS-----PQAYSSLQGLIIME 994


>05_04_0395 -
           20921606-20921869,20921971-20922112,20922206-20922330,
           20922758-20923984
          Length = 585

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -2

Query: 453 ADEIHALFVTNMSLKTLVFCVCVTLASAAIQRSALEPIPDKFSGL 319
           A+++ + F+T  +   ++FC     A    +  A E +P +F GL
Sbjct: 421 ANKMVSPFLTQRTKSKIIFCTAAKSAETLFRYIAPEQVPVQFGGL 465


>03_03_0060 - 14157352-14158851
          Length = 499

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -2

Query: 312 CYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSTDTP 172
           C++R  DGV+P +S T   E  CT     +  V   SC  E+  DTP
Sbjct: 251 CFVRSGDGVVP-ESTTTGMEL-CT--IGGNGGVSVGSCWREIVADTP 293


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,408,219
Number of Sequences: 37544
Number of extensions: 259582
Number of successful extensions: 657
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)