Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_M22
         (469 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64855-1|AAB04980.1|  594|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z68879-7|CAA93088.2|  207|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AF010241-1|AAB65419.1|  207|Caenorhabditis elegans glutathione S...    29   2.2  
AC006619-1|AAK68255.1|  241|Caenorhabditis elegans Hypothetical ...    29   2.2  
Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z81585-2|CAB04682.2|  303|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z81492-3|CAB04030.1|  382|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z50794-6|CAA90659.2|  388|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>U64855-1|AAB04980.1|  594|Caenorhabditis elegans Hypothetical
           protein ZK742.2 protein.
          Length = 594

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +1

Query: 124 NADCVTFFFCXGKGTYRGVCAQLIFTRLVYDSIVRAEVSGAFCFLRV 264
           NADC  F+    +GT  G   Q I+T+  Y  I +A  +   C  ++
Sbjct: 427 NADCHRFWRSADEGTVAGKAQQSIYTQRQYTFIGKAPDNRKVCLAKM 473


>Z68879-7|CAA93088.2|  207|Caenorhabditis elegans Hypothetical
           protein K08F4.11 protein.
          Length = 207

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = -2

Query: 336 DKFSGLQGCYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSTDTPVCTF 160
           +KFS L+  +      +L  D   +S+     RY       + Q+ ++EL  D  V TF
Sbjct: 37  EKFSQLKPTFPSGQVPILCIDGAQFSQSTAIARYLARKFGFVGQTAEEELQADEVVDTF 95


>AF010241-1|AAB65419.1|  207|Caenorhabditis elegans glutathione
           S-transferase protein.
          Length = 207

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = -2

Query: 336 DKFSGLQGCYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSTDTPVCTF 160
           +KFS L+  +      +L  D   +S+     RY       + Q+ ++EL  D  V TF
Sbjct: 37  EKFSQLKPTFPSGQVPILCIDGAQFSQSTAIARYLARKFGFVGQTAEEELQADEVVDTF 95


>AC006619-1|AAK68255.1|  241|Caenorhabditis elegans Hypothetical
           protein C46C11.3 protein.
          Length = 241

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 8/42 (19%), Positives = 25/42 (59%)
 Frame = +2

Query: 83  LCTWSLFYHGFVQRMQIVSRFSSVLVKVHTGVSVLSSSLHDW 208
           L  ++ ++H ++ +  + + +  V + +   + +LSSS+++W
Sbjct: 133 LAVYTFYHHRYMYKRAVAALYLVVAMCIFGAIEILSSSINEW 174


>Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical
           protein F54F11.2 protein.
          Length = 1589

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 330 FSGLQGCYIREFDGVLPFDSVTYSKEA 250
           F+ +  C + E+ G  P D  TY   A
Sbjct: 691 FTNMAQCVVNEYSGFCPLDKATYGSAA 717


>Z81585-2|CAB04682.2|  303|Caenorhabditis elegans Hypothetical
           protein T05E12.2 protein.
          Length = 303

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 15/49 (30%), Positives = 19/49 (38%)
 Frame = +1

Query: 40  YYP*YIYDKCLKFLPVYLVIVLPRLCSKNADCVTFFFCXGKGTYRGVCA 186
           Y P Y Y K     P +++ +L      N D   F FC      R  CA
Sbjct: 117 YIPIYFY-KYRPIFPTFIIFILSICIGLNEDVFLFVFCEFSLQIRPNCA 164


>Z81492-3|CAB04030.1|  382|Caenorhabditis elegans Hypothetical
           protein E03H4.6 protein.
          Length = 382

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 83  LCTWSLFYHGFVQRMQIVSR 142
           +C W L YHG  + M+I+++
Sbjct: 327 ICIWKLVYHGTSRAMKIIAQ 346


>Z50794-6|CAA90659.2|  388|Caenorhabditis elegans Hypothetical
           protein F59F5.5 protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = -2

Query: 342 IPDKFSGLQGCYIREFDGVLPFDSVTYSKEAECTRYFC 229
           I  K   L  CY     G  PF    + K + C  ++C
Sbjct: 204 IERKHENLHYCYALMHKGYKPFGQEVFKKSSTCEGHYC 241


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,823,618
Number of Sequences: 27780
Number of extensions: 230910
Number of successful extensions: 551
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)