Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_M08
(757 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 402 e-113
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 399 e-112
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 174 1e-44
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 101 8e-23
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 32 0.077
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.18
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.72
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 29 0.95
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.7
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 26 5.0
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.0
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.7
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 6.7
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 26 6.7
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 8.8
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 25 8.8
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 402 bits (990), Expect = e-113
Identities = 180/222 (81%), Positives = 201/222 (90%)
Frame = -1
Query: 757 DIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 578
DIERPTY NLNRLI Q+VSSITASLRF G+LNVDL EFQTNLVPYPRIHFPLVTY+P++S
Sbjct: 222 DIERPTYENLNRLIAQVVSSITASLRFAGSLNVDLNEFQTNLVPYPRIHFPLVTYSPIVS 281
Query: 577 AEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKT 398
A KA+HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ +IK+
Sbjct: 282 AAKAFHESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKS 341
Query: 397 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL 218
+RTIQFVDWCPTGFK+GI Y+PP VPG +AKV RAVCMLSNTT+IAEAW+RLDHKFDL
Sbjct: 342 RRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDL 401
Query: 217 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 92
MY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 402 MYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDS 443
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 399 bits (982), Expect = e-112
Identities = 179/222 (80%), Positives = 200/222 (90%)
Frame = -1
Query: 757 DIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 578
DIERP+Y NLNRLI Q+VSSITASLRF+G+LNVDL EFQTNLVPYPRIHFPLVTYAP++S
Sbjct: 218 DIERPSYENLNRLIAQVVSSITASLRFEGSLNVDLAEFQTNLVPYPRIHFPLVTYAPIVS 277
Query: 577 AEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKT 398
A KA+HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ TIK
Sbjct: 278 AAKAFHESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKA 337
Query: 397 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL 218
KRTIQFVDWCPTGFK+GI +PP + G ++AKV RAVCMLSNTT+IAEAW+RLDHKFDL
Sbjct: 338 KRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDL 397
Query: 217 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 92
MY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 398 MYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDS 439
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 174 bits (424), Expect = 1e-44
Identities = 84/223 (37%), Positives = 133/223 (59%), Gaps = 3/223 (1%)
Frame = -1
Query: 754 IERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 575
I+ P+Y +LN L+ +++ +T S RF G LN DL + N+VP+PR+HF +V +AP+ +
Sbjct: 217 IKSPSYDDLNHLVSAVMAGVTTSFRFPGELNSDLRKLAVNMVPFPRLHFFMVGFAPLAAI 276
Query: 574 EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 395
+ + +SV E+T F+ N MV DPRHG+Y+ L+RG V K+V+ I +++TK
Sbjct: 277 GSSSFQAVSVPELTQQMFDANNMMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTK 336
Query: 394 RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 215
+ FV+W P + PP DL + + + N+T+I E + RL +F M
Sbjct: 337 NSAYFVEWIPDNVLKAVCSVPPK-----DL---KMSATFIGNSTSIQEIFRRLGDQFSAM 388
Query: 214 YAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVGMD 95
+ ++AF+HWY GEGM+E EF+EA DL + + Y+E G+D
Sbjct: 389 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGID 431
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 101 bits (243), Expect = 8e-23
Identities = 60/221 (27%), Positives = 113/221 (51%), Gaps = 7/221 (3%)
Frame = -1
Query: 751 ERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS-- 578
+ PT+ N+L+ ++S+ T +LR+ G +N DL +L+P PR HF L +Y P +
Sbjct: 221 QNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPSPRCHFLLTSYTPFTNQQ 280
Query: 577 -AEKAYHEQLSVAEITNACFEPANQMVKCDP-RHGKYMACCMLYRGDVVPKDVNAAIATI 404
E + +V ++ P NQMV +P + +++ + +G+ P DV+ ++ I
Sbjct: 281 VEEAKAIRKTTVLDVMRRLLLPKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRI 340
Query: 403 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 224
+ +R F+ W P +V ++ + P + ++ + ML+N T+IA + R ++
Sbjct: 341 RERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGL-----MLANHTSIASLFKRTLDQY 395
Query: 223 DLMYAKRAFVHWYVGEGMEE---GEFSEAREDLAALEKDYE 110
D + + AF+ Y E + E EF +R+ +A L +YE
Sbjct: 396 DRLRKRNAFLEQYKKEAIFEDDLNEFDSSRDVVADLINEYE 436
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 32.3 bits (70), Expect = 0.077
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Frame = -2
Query: 657 TSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTM--NSFPSPRSQTHASSPPTRW*NATPV 484
TS S L+ + +++ T S+ P PT+ S +P + T+ ++ + +TPV
Sbjct: 381 TSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPV 440
Query: 483 MASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHP 328
++ CT TS P T + S P +N +T S TS P
Sbjct: 441 TSTPLATTNCTTSTSVPY--TSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTP 490
Score = 30.3 bits (65), Expect = 0.31
Identities = 29/105 (27%), Positives = 50/105 (47%)
Frame = -2
Query: 648 SSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTW 469
S+ + + TPV++S++ T SS P T P + T+ ++ + +TPV ++
Sbjct: 499 STSVPYTSTPVTSSNY--TISSSTPVTST------PVTTTNCTTSTSVLYTSTPVTSTPL 550
Query: 468 LAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 334
CT TS P T P S ++ S++ PV+ + TTS
Sbjct: 551 ATTNCTTSTSVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTS 594
Score = 28.3 bits (60), Expect = 1.3
Identities = 27/107 (25%), Positives = 48/107 (44%)
Frame = -2
Query: 654 SPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMAS 475
+P+ T TP++T++ T +S+P T + +P + T+ ++ + +TPV ++
Sbjct: 410 TPTVPPTSSSTPLTTTNC--TTSTSVPYTSTPVT-STPLATTNCTTSTSVPYTSTPVTST 466
Query: 474 TWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 334
CT TS P T + S P +N +T S TS
Sbjct: 467 PLTTTNCTTSTSIPY--TSTPVTSTPLTTTNCTTSTSVPYTSTPVTS 511
Score = 25.8 bits (54), Expect = 6.7
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Frame = -2
Query: 624 TPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVV 445
TP++T++ T +S+P T + +P + T+ ++ + +TPV +S + T V
Sbjct: 466 TPLTTTNC--TTSTSIPYTSTPVT-STPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPV 522
Query: 444 TSYPRM*TRPSLPSKPSVLSNSSTGVQ-PVSRSVSTTS 334
TS P T + + SVL S+ P++ + TTS
Sbjct: 523 TSTPV--TTTNCTTSTSVLYTSTPVTSTPLATTNCTTS 558
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.1 bits (67), Expect = 0.18
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = -2
Query: 582 SLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPS 403
S+P+ P P S + P P + S VV P + RP++P
Sbjct: 513 SVPQPPAAPVVPEAPSVHQPPAAPV-----APEVPSAPQRPAAPVVPEAPSVPQRPAVPV 567
Query: 402 KPSVLSNSSTGVQPVSRSVSTTSHPPWCP 316
P LS V PV+ V + PP P
Sbjct: 568 VPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
Score = 25.4 bits (53), Expect = 8.8
Identities = 23/90 (25%), Positives = 31/90 (34%)
Frame = -2
Query: 582 SLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPS 403
S+P+RP + P S P P + +A S P+ P P
Sbjct: 558 SVPQRPAVPVVPEALSVPQPPVAPVA--PEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPE 615
Query: 402 KPSVLSNSSTGVQPVSRSVSTTSHPPWCPE 313
PSV + V P + SV P PE
Sbjct: 616 VPSVPQRPAVPVVPEAPSVPQPPAAPVVPE 645
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.1 bits (62), Expect = 0.72
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = -2
Query: 615 STSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSY 436
STS + T SS RP +S S +H SS ++ ++ PV ++ + + +S+
Sbjct: 377 STSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKS-SSAPVSSAFYHNSTSSRSSSH 435
Query: 435 PRM*TRPSLPSKPSVLSNSST 373
+ SL SKP + ++SS+
Sbjct: 436 SSSHSLSSLSSKPILTASSSS 456
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 28.7 bits (61), Expect = 0.95
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 410 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGKLFMVGLLGRDDW 589
S G +LGY ++ A++V+A + V HL+ G D + K G D
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK-------GLDML 459
Query: 590 RVRDQWEVDTGVR 628
R Q+E++ G++
Sbjct: 460 VDRVQYELEAGLQ 472
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -1
Query: 538 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 413
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -2
Query: 651 PSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTR 505
P+++ P S + T +SS+P P N+ PSP S + AS+ P R
Sbjct: 1232 PTAKAPPVPAPSSEAPSVSTPRSSVPS-PHSNASPSPTSSSMASAAPAR 1279
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 588 QSSLPRRPTMNSFPSPRSQTHASSPPTR 505
+ SLPRRP+ +P S T ++ PP +
Sbjct: 738 RGSLPRRPSSALLTNPISITKSNPPPVK 765
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -2
Query: 414 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 328
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 25.8 bits (54), Expect = 6.7
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -2
Query: 654 SPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSP 514
SPS LT L S++ S + + + R+ T +S SP+ Q+ S+P
Sbjct: 619 SPSKMLT-TLRNNSSTFPSLRKNAMIARKSTADSLSSPKRQSVPSTP 664
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 433 WVRRHHGTAYSKPCTCHDGG 492
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 6.7
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -2
Query: 627 LTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMAS 475
LTP + S +S + +S +R ++N+ PS + +H+SS T + PV+++
Sbjct: 130 LTPKNPSLFSSSNAAS--QRGSLNTAPSNFAYSHSSSLQTSASSRPPVLSN 178
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 8.8
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 417 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 322
P PS+P+++SN ST G+Q V V + W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 25.4 bits (53), Expect = 8.8
Identities = 22/84 (26%), Positives = 36/84 (42%)
Frame = -2
Query: 621 PVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVT 442
P+ SH S + S+ R + + H S PT+ +AT + S AV T
Sbjct: 253 PLDASHLSSQQLLSMYRDQVSHGVTPSTFRNHESFMPTQLVSATELSKSVDNAVLPIPPT 312
Query: 441 SYPRM*TRPSLPSKPSVLSNSSTG 370
+ P + P S P + S +++G
Sbjct: 313 TAPAV-VSPPASSFPLMSSAATSG 335
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,218,543
Number of Sequences: 5004
Number of extensions: 69431
Number of successful extensions: 280
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 278
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 361294920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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