Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_M05
(827 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 100 1e-21
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 95 6e-20
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 66 2e-11
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 64 2e-10
05_01_0018 + 125697-126130,126231-126356,126726-126825,126950-12... 31 1.1
04_04_0924 - 29449285-29449290,29449386-29449575,29449669-294497... 31 1.1
04_03_0205 + 12649724-12650191,12651493-12652025,12652114-126522... 31 1.1
05_01_0201 - 1441063-1443836,1444658-1445758,1446367-1447179,144... 31 1.5
09_01_0039 - 687711-688607,692336-693113,693414-693501,693761-69... 29 6.0
04_01_0418 - 5531652-5531827,5535111-5535195,5535250-5535402,553... 29 6.0
11_01_0307 + 2304500-2306023 28 7.9
04_04_0464 - 25405629-25405665,25406644-25406710,25408112-254083... 28 7.9
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 100 bits (240), Expect = 1e-21
Identities = 68/246 (27%), Positives = 118/246 (47%), Gaps = 2/246 (0%)
Frame = -1
Query: 824 FXSYFQTPLTYLEGGNPSGFNHVVTNAGAQKRMFQVKGKRDVRVRQVDPQIASMNKGDCF 645
F SYF+ + LEGG SGF + + R++ KGKR +RV++V +S+N D F
Sbjct: 114 FLSYFKPCIIPLEGGFASGFKTPEEDK-FETRLYICKGKRAIRVKEVPFARSSLNHDDVF 172
Query: 644 VLSLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGKVDIVD--KYSSDVDVQKFF 471
+L + IY F G + E+ KA+ +++ H+G V IVD K ++ D +F+
Sbjct: 173 ILDTEKKIYQFNGANSNIQERAKALEAIQHLKETYHNGVCDVAIVDDGKLQAESDSGEFW 232
Query: 470 TALGSGVKDLVPDESTGGDDQEFERNEASNVILSEVSDATGKIKVTPLSKPFKQENLSPQ 291
G + ++ DD E L +++ K++ T L+K + N
Sbjct: 233 VLFGGFAP--IGKKAICDDDVVLETTAPK---LYSINNGQLKLEDTVLTKSILENN---- 283
Query: 290 NAYILDTISGNIYVWIGKQATANEKSQAMTKAQELLNAKNYPSWVQVTRVLQNTEPAAFK 111
+++D ++++W+G+ E+ A +E + +N P +VTRV+Q E FK
Sbjct: 284 KCFLVD-CGSDLFIWVGRLTQVEERKAASAAVEEFIATQNRPKTTRVTRVIQGYENHTFK 342
Query: 110 QYFFTW 93
F +W
Sbjct: 343 SKFESW 348
Score = 48.8 bits (111), Expect = 5e-06
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Frame = -1
Query: 422 GGDDQEFERNEASNVI----LSEVSDATGKIKVTPLSKPFKQENLSPQNAYILDTISGNI 255
GG RN +V+ L S GK++VT + F Q++L ++ +LDT G +
Sbjct: 638 GGKQNYTSRNATHDVVREPHLYTFSLRNGKLEVTEIFN-FSQDDLLTEDMMVLDT-HGEV 695
Query: 254 YVWIGKQATANEKSQAMTKAQELL-NAKNYPSW---VQVTRVLQNTEPAAFKQYFFTW 93
+VW+G+ A EK +A Q+ +A + S V + +V++ EP F+ Y F+W
Sbjct: 696 FVWMGQCVDAKEKQKAFEIGQKYAEHAAAFESLSPDVPLYKVVEGNEPCFFRTY-FSW 752
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 95.1 bits (226), Expect = 6e-20
Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 3/247 (1%)
Frame = -1
Query: 824 FXSYFQTPLTYLEGGNPSGFNHVVTNAGAQ-KRMFQVKGKRDVRVRQVDPQIASMNKGDC 648
F SYF+ + EGG SGF H N R+F +GK V V++V +S+N D
Sbjct: 167 FLSYFKPCIIPEEGGIASGFRHTEINEREHVTRLFVCRGKHTVHVKEVPFARSSLNHDDI 226
Query: 647 FVLSLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGKVDIVD--KYSSDVDVQKF 474
F+L + I+ F G + E+ KA+ ++D +H G+ V V+ K +D D +F
Sbjct: 227 FILDTKSKIFQFNGSNSSIQERAKALEVVQYLKDSNHEGKCDVGSVEDGKLMADADAGEF 286
Query: 473 FTALGSGVKDLVPDESTGGDDQEFERNEASNVILSEVSDATGKIKVTPLSKPFKQENLSP 294
+ G P D + + S+ ++ T + L++ E L
Sbjct: 287 WGLFGG----FAPLPRKTFSDLNGKDSAFSSKLICLNKGQTVPVDFDVLTR----ELLDS 338
Query: 293 QNAYILDTISGNIYVWIGKQATANEKSQAMTKAQELLNAKNYPSWVQVTRVLQNTEPAAF 114
Y+LD IYVW+G++ E+ +A + A+ELL N P + R+++ E F
Sbjct: 339 TKCYLLD-CGSEIYVWMGRETPLEERKRAGSAAEELLREVNRPK-SHIVRLMEGFETVIF 396
Query: 113 KQYFFTW 93
+ F W
Sbjct: 397 RSKFSKW 403
Score = 55.6 bits (128), Expect = 5e-08
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 14/258 (5%)
Frame = -1
Query: 824 FXSYFQTPLTYLEGGNPSGFNHVVTNAGAQK--------RMFQVKGK--RDVRVRQVDPQ 675
F S FQ L +GG +G+ V+ G + +F+V+G +++ QVD
Sbjct: 541 FFSIFQN-LVIFKGGVSTGYKKFVSENGIEDDTYSENGVALFRVQGSGPENMQAIQVDTA 599
Query: 674 IASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGKVDIVDKYSS 495
S+N C+VL + ++ ++G + ++++ A R D + K S
Sbjct: 600 ATSLNSSYCYVLHDGDTLFTWIGNLSSSMDQELA------ERQLDVIKPNLQSRMLKEGS 653
Query: 494 DVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASNVILSEVSDATGKIKVTPLSKPF 315
+ D +F+ L GVK P Q+ +++ S+ L + + G +KV + F
Sbjct: 654 EYD--QFWKLL--GVKSEYP-------SQKIAKDQESDPHLFSCTFSKGVLKVREIFN-F 701
Query: 314 KQENLSPQNAYILDTISGNIYVWIGKQATANEKSQAMTKAQELLN----AKNYPSWVQVT 147
Q++L ++ +ILD S ++VW+G++ ++QA++ ++ L +N V
Sbjct: 702 TQDDLMTEDVFILDCHS-CVFVWVGQRVDTKMRAQALSVGEKFLELDILMENSSQETPVY 760
Query: 146 RVLQNTEPAAFKQYFFTW 93
+ + +EP F + FFTW
Sbjct: 761 VITEGSEPQFFTR-FFTW 777
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 66.5 bits (155), Expect = 2e-11
Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Frame = -1
Query: 818 SYFQTPLTYLEGGNPSGFNHVVTNAGAQ-KRMFQVKGKRDVRVRQVDPQIASMNKGDCFV 642
SYF+ + GG SGFNHV N R++ +GK V V++V +S+N D F+
Sbjct: 130 SYFRPCIMPQPGGVASGFNHVEVNQQDHVTRLYVCQGKHVVHVKEVPFVRSSLNHEDIFI 189
Query: 641 LSLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGKVDIVD--KYSSDVDVQKFFT 468
L N I+ F G + E+ KA+ ++D H G+ +V V+ K +D + +F+
Sbjct: 190 LDTANKIFQFNGSNSCIQERAKALEVVQYIKDTFHEGKCEVAAVEDGKLMADTEAGEFWG 249
Query: 467 ALGSGVKDLVPDEST--GGDDQE 405
G G L S+ GDD+E
Sbjct: 250 LFG-GFAPLPKKTSSEDNGDDKE 271
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Frame = -1
Query: 317 FKQENLSPQNAYILDTISGNIYVWIGKQATANEKSQAMTKAQELL----NAKNYPSWVQV 150
F Q++L ++ ++LD + +++VW+G++ A +SQAM ++ L +N +
Sbjct: 622 FTQDDLMAEDIFVLDCRT-DLFVWVGQEVDAKLRSQAMDIGEKFLLHDFLMENLSQDTPI 680
Query: 149 TRVLQNTEPAAFKQYFFTW 93
V + +EP F + FFTW
Sbjct: 681 FIVTEGSEPQFFTR-FFTW 698
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Frame = -1
Query: 824 FXSYFQTPLTYLEGGNPSGFNHVVTNAGAQK--------RMFQVKGK--RDVRVRQVDPQ 675
F FQ+ L +GG SG+ + + G +F+++G +++ QVD
Sbjct: 497 FFVIFQS-LQVFKGGLSSGYKNFIAVNGTDDDTYVEGGLALFRIQGSGSENMQAIQVDAV 555
Query: 674 IASMNKGDCFVLSLDNDIYVFVGEKAKNVE 585
+S+N C++L N ++ + G +++
Sbjct: 556 SSSLNSSYCYILHNGNTVFTWTGNLTTSLD 585
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 63.7 bits (148), Expect = 2e-10
Identities = 48/196 (24%), Positives = 92/196 (46%), Gaps = 3/196 (1%)
Frame = -1
Query: 671 ASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGKVDIVD--KYS 498
+S+N D F+L + I+ F G + E+ KA+ ++D H G+ +V V+ +
Sbjct: 170 SSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTFHEGKCEVAAVEDGRLM 229
Query: 497 SDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASNVILSEVSDATGKIKVTPLS-K 321
+D + +F+ G G L P + D++++E + ++ GK++ P++ +
Sbjct: 230 ADAEAGEFWGFFG-GFAPL-PRRAPVEDNEKYEETVFKLLCFNQ-----GKLE--PINYE 280
Query: 320 PFKQENLSPQNAYILDTISGNIYVWIGKQATANEKSQAMTKAQELLNAKNYPSWVQVTRV 141
E L Y+LD ++VW+G+ + E+ A A++LL+ N V +V
Sbjct: 281 SLLHELLKTNKCYLLD-CGVELFVWMGRTTSLQERKSASEAAEKLLSDDNRTK-THVIKV 338
Query: 140 LQNTEPAAFKQYFFTW 93
++ E FK F W
Sbjct: 339 IEGFETVMFKSKFKEW 354
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Frame = -1
Query: 350 GKIKVTPLSKPFKQENLSPQNAYILDTISGNIYVWIGKQATANEKSQAMTKAQELLN--- 180
G +K+ + F Q++L ++ +ILD S +I+VW+G+Q + QA+ ++ +
Sbjct: 633 GNLKIKEIYH-FTQDDLMTEDVFILDCHS-DIFVWVGQQVDVKVRLQALDIGEKFVKLDF 690
Query: 179 -AKNYPSWVQVTRVLQNTEPAAFKQYFFTW 93
+N S + +++ +EP F + FFTW
Sbjct: 691 LMENLSSDTPIFVIMEGSEPTFFTR-FFTW 719
>05_01_0018 +
125697-126130,126231-126356,126726-126825,126950-126969,
127118-127220,127331-127469,127577-127791,127873-128523
Length = 595
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -1
Query: 554 VRDQDHHGRGKVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTG---GDDQEFERNEAS 384
+ Q HG V + Y D D ++F GSG +DL ++ T DQ+FE+ A+
Sbjct: 113 IAGQSTHGAQSVALSGGYVDDEDHGEWFLYTGSGGRDLSGNKRTNKEQSSDQKFEKLNAA 172
>04_04_0924 -
29449285-29449290,29449386-29449575,29449669-29449772,
29449845-29449976,29450064-29450162,29450439-29450451,
29450688-29450719,29450802-29450921,29450992-29451105,
29451192-29451325,29454014-29454251
Length = 393
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 4/99 (4%)
Frame = -1
Query: 551 RDQD----HHGRGKVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEAS 384
RD+D H R KV+I + +SD D V DES+ DQ FE N+
Sbjct: 75 RDEDEVMGHRKRSKVNISSESNSDNDCSLSSDNHDGDVHLSNHDESSDNHDQHFEENDPL 134
Query: 383 NVILSEVSDATGKIKVTPLSKPFKQENLSPQNAYILDTI 267
+ E + K+K+ +PF ++ ++ D+I
Sbjct: 135 LHLTKE--EHMKKLKIKLGKRPFTDDHKKKRHKVESDSI 171
>04_03_0205 +
12649724-12650191,12651493-12652025,12652114-12652239,
12652625-12652724,12652880-12652899,12653035-12653137,
12653213-12653351,12653448-12653662,12653772-12654320
Length = 750
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -1
Query: 554 VRDQDHHGRGKVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGD---DQEFERNEAS 384
+ Q HG V + Y D D ++F GSG +DL ++ T + DQ+FE+ A+
Sbjct: 302 IAGQSTHGAQSVALSGGYLDDEDHGEWFLYTGSGGRDLSGNKRTSKEQSFDQKFEKLNAA 361
>05_01_0201 -
1441063-1443836,1444658-1445758,1446367-1447179,
1447386-1447440
Length = 1580
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/101 (22%), Positives = 44/101 (43%)
Frame = -2
Query: 820 YHISRHP*PIWREGIRPVLTTSSRTREPRNECSRSKGSEMSALDKSIRR*LR*TKATASF 641
+ + RH +W+E +R + R++ + ++ S+ + + R +
Sbjct: 604 FRVLRH---LWKEDVRLLSVRKQRSKSHKRTDQSNRSSQSGSQRQRSSNRSRLAVPAGNL 660
Query: 640 LV*TTTSMSLSARKLRTLRSLKRFRSPIKYGIRIITDAEKS 518
T MS ARKL + LKR R+ +K I+ + EK+
Sbjct: 661 STFPITEMSGVARKLFSEFQLKRCRNYLKMPALIVDEKEKA 701
>09_01_0039 -
687711-688607,692336-693113,693414-693501,693761-694148,
694176-694401,694527-694680,695073-695145
Length = 867
Score = 28.7 bits (61), Expect = 6.0
Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 1/149 (0%)
Frame = -1
Query: 722 QVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEK-AKNVEKLKAISFANQVRD 546
++ G+ RVR+VD + N+ DCF + +D + + K + V K+KA N R
Sbjct: 33 ELYGRSFGRVREVDVEADGCNRHDCFRILVDLPVAKPLKSKIGQKVNKVKATYQPNASRK 92
Query: 545 QDHHGRGKVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASNVILSE 366
G SS QK A ++VP DD + E I +
Sbjct: 93 LVFRSAGSA----VSSSSRRGQKEDWA------EVVPPRVDACDDFDHRETEGDVQIDEQ 142
Query: 365 VSDATGKIKVTPLSKPFKQENLSPQNAYI 279
++ T K+K ++ FK + S + +
Sbjct: 143 LAQQTHKLKGGMENQIFKSDKGSTDDTLV 171
>04_01_0418 -
5531652-5531827,5535111-5535195,5535250-5535402,
5535516-5535632,5536136-5536363
Length = 252
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = -1
Query: 722 QVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKAISFANQVR 549
+VKG++D R QI + GDC+++S + + E +N L +S N+++
Sbjct: 125 KVKGEKDEVYRGASTQILGVAVGDCYIMSTSGNDAGMLLEGVRNNNGL--VSLNNELK 180
>11_01_0307 + 2304500-2306023
Length = 507
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = -3
Query: 282 YFGHHIWQHLRLDREAGYRKREISGHDESSGIVER*ELSFVGASDQS 142
Y GH +WQ R R AG ++E++ SSG + +L +G+S+ S
Sbjct: 464 YVGHRLWQRRRRRRRAGGMEQELT----SSGPYK--DLKSMGSSNSS 504
>04_04_0464 -
25405629-25405665,25406644-25406710,25408112-25408373,
25408989-25409198,25409818-25410006,25410087-25410548,
25410889-25410936,25411972-25412301
Length = 534
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 360 RRHGKDQSDATIEAFQARELESTERVYFGHHIWQHLRLDREAG 232
R H D + E+ + R LE+ ER Y W+ L+ D E+G
Sbjct: 22 RNHEDDDDEEEEESGEGRVLEAWERAYADDRSWEALQED-ESG 63
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,723,020
Number of Sequences: 37544
Number of extensions: 445382
Number of successful extensions: 1360
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1351
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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