Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_M05
         (827 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    26   1.6  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   5.0  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +3

Query: 180  VQQFLSFRHGL--RFLVCGSLLPDP 248
            V Q L+ RH L  RFL C   LPDP
Sbjct: 1053 VHQQLALRHKLVERFLPCYRYLPDP 1077


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +1

Query: 220 SFAVACFPIQT*MLPDMVSKIYAFCGLKFSCLKGFDS 330
           SF++A FPI    +P  V+ +  FCGL+ + +  FD+
Sbjct: 59  SFSMA-FPINL-AVPVTVTLLLVFCGLREADVCAFDN 93


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 809,402
Number of Sequences: 2352
Number of extensions: 15526
Number of successful extensions: 31
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)