Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_L24
         (441 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   6.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.9  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   6.9  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    20   9.1  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    20   9.1  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    20   9.1  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    20   9.1  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
 Frame = -2

Query: 170 LLGYFQ----SRFFFLFRLNALPVYCFFFH 93
           LLG  Q    + F F+ R   LP Y +FF+
Sbjct: 61  LLGIIQFPISAHFSFMSRFLCLPFYSYFFY 90


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
 Frame = -2

Query: 170 LLGYFQ----SRFFFLFRLNALPVYCFFFH 93
           LLG  Q    + F F+ R   LP Y +FF+
Sbjct: 17  LLGIIQFPISAHFSFMSRFLCLPFYSYFFY 46


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -1

Query: 114 CILFFFS*IVTKLNYRNSYCFLRN**CLLYALFSVITF 1
           CI +F+S  +    +   YC L    C+ Y  ++ I F
Sbjct: 211 CIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILF 248



 Score = 22.2 bits (45), Expect = 2.2
 Identities = 14/72 (19%), Positives = 30/72 (41%)
 Frame = -2

Query: 311 CVVIILLCFSFVFNKYFIL*RYKGSYIIIYLLISERHIVFVRLCI*YLLGYFQSRFFFLF 132
           CV+IILLC  + +  + +   +    + IY      H++F    I + +        + F
Sbjct: 230 CVLIILLCIYYFYYAFILFTVHLLLLVCIYYFY-YMHLLFCCAFIIFTMHLLFLLCIYYF 288

Query: 131 RLNALPVYCFFF 96
               + + C ++
Sbjct: 289 YCALIILLCIYY 300



 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 291 LFFFCIQ*IFYSLTVQGVIYYYILAY 214
           LF  CI   + +L +   IYY+  A+
Sbjct: 280 LFLLCIYYFYCALIILLCIYYFCRAF 305



 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 311 CVVIILLCFSFVFNKYFIL 255
           C +IILLC  + F + FI+
Sbjct: 290 CALIILLCI-YYFCRAFII 307


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 6/31 (19%), Positives = 17/31 (54%)
 Frame = -3

Query: 241  GHILLYTCLFRKGILCSSDYVYNIYWDISKA 149
            G+++  + L+   ++C     Y+   ++SK+
Sbjct: 909  GYLIFVSTLYTANVVCICHVCYSTIQEVSKS 939


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 127 NRKRKKKRLWKYPNRYYIHSRTNTICLSEISK 222
           NR+ K K+  K PN   +  +TN   ++  +K
Sbjct: 283 NRRMKWKKDNKLPNTKNVRRKTNPAGVTTTTK 314


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = -2

Query: 308 VVIILLCFSFVFNKYFIL*RYKGSYIIIYLLISERHIVFVRLCI 177
           +V +   F ++F  Y+I      + II +     + ++F   CI
Sbjct: 143 LVFVFCYFIYLFTVYYIYYSVHEASIINFGYTLAKFMIFTSTCI 186


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 127 NRKRKKKRLWKYPNRYYIHSRTNTICLSEISK 222
           NR+ K K+  K PN   +  +TN   ++  +K
Sbjct: 283 NRRMKWKKDNKLPNTKNVRRKTNPAGVTTTTK 314


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 246 VPLKNKIFIEYKRKTK*DNYDAL 314
           +P+K ++  + K +T    YDAL
Sbjct: 78  IPMKGRLLHDLKGRTTSVPYDAL 100


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 246 VPLKNKIFIEYKRKTK*DNYDAL 314
           +P+K ++  + K +T    YDAL
Sbjct: 78  IPMKGRLLHDLKGRTTSVPYDAL 100


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 246 VPLKNKIFIEYKRKTK*DNYDAL 314
           +P+K ++  + K +T    YDAL
Sbjct: 78  IPMKGRLLHDLKGRTTSVPYDAL 100


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -3

Query: 190 SDYVYNIYWDISKAVFFFFFD*TPYLYTVFFFIN 89
           + ++ N Y+ I +    F+      L TV++FI+
Sbjct: 291 TSFLNNFYFIIFQVFESFYLHKATTLETVYYFIS 324


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,677
Number of Sequences: 336
Number of extensions: 2457
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)