Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_L24
         (441 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0149 + 989698-991797                                             27   5.1  
01_06_1376 - 36757458-36757923,36758040-36758473                       27   8.8  

>05_01_0149 + 989698-991797
          Length = 699

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -2

Query: 284 SFVFNKYFIL*RY-KGSYIIIYLLISERHIVFVRLCI*YLLGYFQSRFFFLFRLNALPVY 108
           SF+F    IL  +  GS  + +L     H++     +  +L YF     F    + +P Y
Sbjct: 522 SFLFFVLIILASFWAGSGFVTFLSAVVPHVMLGYTVVVAILAYFLLFSGFFINRDRIPSY 581

Query: 107 CFFFHKLS 84
             +FH LS
Sbjct: 582 WIWFHYLS 589


>01_06_1376 - 36757458-36757923,36758040-36758473
          Length = 299

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 154 WKYPNRYYIHSRTNTICLSEISKYII 231
           W+  +RY++ SRT T   S   KY I
Sbjct: 159 WRNISRYFVTSRTPTQVASHAQKYFI 184


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,765,782
Number of Sequences: 37544
Number of extensions: 172665
Number of successful extensions: 282
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 835800280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)