Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_L23
         (514 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.2  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   1.6  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   1.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   3.7  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   6.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   6.4  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   6.4  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   6.4  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   6.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   6.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 362  SHWETQGDTEFRSRGTTTSS 421
            +HW+T+  T   +R TTT S
Sbjct: 1181 NHWQTKTTTSTTTRPTTTVS 1200


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 116 YDTRIVLKVYKYSITPSERFPLPDD 190
           Y   +VL    YS+   E F  PDD
Sbjct: 4   YACLLVLSALIYSVLGQENFKCPDD 28


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 116 YDTRIVLKVYKYSITPSERFPLPDD 190
           Y   +VL    YS+   E F  PDD
Sbjct: 4   YACLLVLSALIYSVLGQENFKCPDD 28


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -3

Query: 419 RTWWFRGSEIPYLPGSPSGSSNQL 348
           R WW R   + Y+  + SG    L
Sbjct: 73  RPWWERYQPVSYILNTRSGDETAL 96


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -3

Query: 419 RTWWFRGSEIPYLPGSPSGSSNQL 348
           R WW R   + Y+  + SG    L
Sbjct: 72  RPWWERYQPVSYILNTRSGDEAAL 95


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -3

Query: 419 RTWWFRGSEIPYLPGSPSGSSNQL 348
           R WW R   + Y+  + SG    L
Sbjct: 73  RPWWERYQPVSYILNTRSGDEAAL 96


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -1

Query: 307 VQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 185
           +QG       +   G+   ++  VKK KPE+    + A ++
Sbjct: 144 IQGTASEATLVALLGAKARMIDRVKKEKPEMSDSEIVAKLV 184


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 507 IRPADGQQKLLASRPYYFFQNF 442
           +RP     +L A  PYY F+ F
Sbjct: 11  LRPIFAVCRLFALVPYYNFEKF 32


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 75  LLMAEPFISPLLLTMTPALSSK 140
           LL   P++SPL  +  P  +S+
Sbjct: 107 LLRPHPYLSPLFHSAAPRTASR 128


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 312 ITYRFFAPVLSAQLITAPTGRP 377
           I  RF +  + A L+T+P  RP
Sbjct: 225 IVERFTSDRVHAALVTSPRARP 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,705
Number of Sequences: 336
Number of extensions: 2987
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)