Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_L23
(514 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0319 - 16712572-16712654,16712756-16712797,16713955-167142... 210 4e-55
03_01_0276 + 2124538-2124550,2124678-2124962,2126813-2126854,212... 210 4e-55
02_05_1201 + 34929577-34929589,34930252-34930587,34931378-349314... 203 8e-53
12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845 59 2e-09
07_03_1151 + 24385272-24386543 30 0.95
05_07_0365 - 29662703-29662710,29664321-29664378,29664675-296647... 30 1.3
04_04_1586 - 34621945-34623366 29 1.7
03_06_0296 + 32901696-32901892,32901989-32902232,32903992-329041... 29 2.9
08_02_1367 + 26432425-26432622,26434071-26434162,26434337-264344... 28 3.8
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 28 3.8
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 28 3.8
06_03_0025 - 15577231-15577420,15577682-15577813,15578025-155781... 28 5.1
05_07_0367 - 29700855-29700920,29701092-29701149,29701446-297015... 28 5.1
11_06_0538 + 24759030-24759379,24759380-24759488,24759604-247596... 27 6.7
06_01_0221 + 1690978-1692171,1692265-1692276 27 6.7
03_05_0446 - 24414351-24414427,24414491-24414881 27 6.7
02_04_0663 + 24820745-24821065,24821415-24821861,24821949-248223... 27 6.7
12_01_0913 + 8882193-8883510,8887633-8887865,8889619-8889871,889... 27 8.8
11_04_0068 - 13116037-13116414,13116501-13116947,13117026-131177... 27 8.8
06_01_0004 - 59511-59576,59749-59806,60101-60144,60455-60512,608... 27 8.8
05_07_0364 - 29611149-29611211,29611441-29611623,29611796-296118... 27 8.8
03_02_0642 + 10086400-10086505,10086675-10087014,10087072-100871... 27 8.8
03_01_0084 + 676538-676669,677828-677959,678085-678210,678820-67... 27 8.8
01_05_0287 - 20460956-20461282,20462051-20462201,20462285-204625... 27 8.8
>10_08_0319 -
16712572-16712654,16712756-16712797,16713955-16714239,
16714346-16714358
Length = 140
Score = 210 bits (514), Expect = 4e-55
Identities = 96/118 (81%), Positives = 112/118 (94%)
Frame = -1
Query: 430 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDM 251
MSKRGRGGSAG KFR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 250 IVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAIS 77
++ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN KGEMKGSAI+
Sbjct: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAIT 118
>03_01_0276 +
2124538-2124550,2124678-2124962,2126813-2126854,
2126943-2127025
Length = 140
Score = 210 bits (514), Expect = 4e-55
Identities = 96/118 (81%), Positives = 112/118 (94%)
Frame = -1
Query: 430 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDM 251
MSKRGRGGSAG KFR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 250 IVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAIS 77
++ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN KGEMKGSAI+
Sbjct: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAIT 118
>02_05_1201 +
34929577-34929589,34930252-34930587,34931378-34931419,
34931630-34931712
Length = 157
Score = 203 bits (495), Expect = 8e-53
Identities = 92/114 (80%), Positives = 108/114 (94%)
Frame = -1
Query: 418 GRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVAT 239
GRGGSAG KFR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM++AT
Sbjct: 22 GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT 81
Query: 238 VKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAIS 77
VKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN KGEMKGSAI+
Sbjct: 82 VKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAIT 135
>12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845
Length = 170
Score = 58.8 bits (136), Expect = 2e-09
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Frame = -1
Query: 355 INCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKK---VMPAVVI 185
+ DN+GAK V+ +Q ++G+ A GD I+ +VK+ +P + K V+ VV+
Sbjct: 58 LKVVDNSGAKR--VMCIQSLRGK----KGARLGDTIIGSVKEAQPRGKVKKGDVVYGVVV 111
Query: 184 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAI 80
R R DG I F+DNA V+VNNKGE+ G+ +
Sbjct: 112 RAAMKRGRNDGSEIQFDDNAIVLVNNKGELIGTRV 146
>07_03_1151 + 24385272-24386543
Length = 423
Score = 30.3 bits (65), Expect = 0.95
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +3
Query: 330 APVLSAQLITAPTGRPREIRNFAPAEPPRPLLDILLYQNFERNNRDVKLVTFVVHR 497
AP + P R R +R APA P P +LL FE+ DV L ++ R
Sbjct: 147 APAAVTVIAAPPRRRRRSMRVAAPAPAPAPPRPVLL-GGFEKEQEDVALGLLMLSR 201
>05_07_0365 -
29662703-29662710,29664321-29664378,29664675-29664732,
29665029-29665086,29665737-29665794,29666091-29666134,
29666445-29666502,29666799-29666981,29667154-29667211,
29667508-29667565,29667862-29667919,29668216-29668259,
29668570-29668627,29668924-29669106,29669279-29669336,
29669633-29669676,29669987-29670044,29670341-29670398,
29670696-29670753,29671050-29671052
Length = 420
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 375 PREIRNFA-PAEPPRPLLDILLYQNFERNNR 464
P +IR FA P P+L IL Y F RNNR
Sbjct: 383 PSDIRCFAEPTAASWPMLWILRYSTFRRNNR 413
>04_04_1586 - 34621945-34623366
Length = 473
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -1
Query: 430 MSKRGRGGSAGAKFRISLGLPVGAV-INCADNTGAKNLYVIAVQGIKGRLNRLPAAGS 260
++ RG GG+ + +PVGAV + N A + Y + + GI RLP S
Sbjct: 282 LASRGAGGAGSLVLGRTEAVPVGAVWVPLVRNNQASSFYYVGLTGIGVGGERLPLQDS 339
>03_06_0296 +
32901696-32901892,32901989-32902232,32903992-32904112,
32904219-32904406
Length = 249
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 119 DTRIVLKVYKYSITPSERFPLPDDHCRHYLFPEFRFTLFDCGHNHV 256
+ I+++ Y+ T +R P P D + +F F L+DC +N V
Sbjct: 101 EINIIIEAYR---TLRDRGPYPADQVVRDINGKFAFVLYDCSNNSV 143
>08_02_1367 +
26432425-26432622,26434071-26434162,26434337-26434403,
26434519-26434638,26434792-26435023,26435525-26435606,
26435985-26436117,26436332-26436537,26436633-26436758,
26437208-26437907
Length = 651
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +2
Query: 218 FRFTLFDCGHNHVPGTGRRQSVQATFDTLDSDHIQILCPCVVGAVDYCSHW 370
FRF + D H+ GT + + ++ T+D H L + Y S+W
Sbjct: 455 FRFCIADSEHDWREGTDQYKFIEQCLSTVDRKHQPWLIFAAHRVLGYSSNW 505
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 330 APVLSAQLITAPTGRPREIRNFAPAEPPRP 419
AP S+ L TAP P + + FAP PP P
Sbjct: 328 APNASSSLFTAPV--PADRQQFAPPPPPSP 355
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = -1
Query: 409 GSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAG 263
GSA A + L A + +TG GI G L+RLPA G
Sbjct: 327 GSAAAIMSATALLQKAAELGATTSTGCYGGVAFPAMGIAGGLDRLPAIG 375
>06_03_0025 -
15577231-15577420,15577682-15577813,15578025-15578173,
15579012-15579071,15593208-15593297,15593604-15593871,
15594517-15594608,15595355-15595441,15597333-15597440,
15597709-15597822,15598253-15598420,15599442-15599579,
15599699-15599908,15600986-15601237,15601965-15602111,
15603327-15603443
Length = 773
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 164 SERFPLPDDHCRHYLFPEFRFTLFDCGHNHVPGTGRRQS 280
S R PLP+D C Y+ ++R + H+ G R S
Sbjct: 25 SSRVPLPEDTCDSYVEQKYRCYIRTLKGCHISGRNRLDS 63
>05_07_0367 - 29700855-29700920,29701092-29701149,29701446-29701503,
29701800-29701857,29702154-29702211,29702508-29702551,
29702840-29703022,29703192-29703249,29703545-29703602,
29703897-29703954,29704250-29704307,29704956-29705013,
29705310-29705367,29705664-29705721,29706348-29706398,
29706695-29706752,29707049-29707106,29707403-29707459,
29707754-29707810,29708085-29708135,29708431-29708507,
29708785-29708842,29709139-29709195,29709490-29709546,
29709821-29709893,29710167-29710224,29710521-29710578,
29710875-29710931,29711558-29711608,29711904-29711980,
29712258-29712315,29712612-29712669,29712966-29713016,
29713667-29713717,29714014-29714057,29714368-29714444,
29714722-29714779,29715076-29715126,29715423-29715480,
29715776-29715833,29716130-29716187,29716484-29716534,
29716831-29716907,29717185-29717242,29717539-29717589,
29718240-29718316,29718594-29718651,29718947-29719004,
29719301-29719351,29719648-29719705,29723277-29723334,
29723631-29723681,29724331-29724388,29724684-29724741,
29725038-29725088,29725385-29725442,29725738-29725814,
29726092-29726148,29726444-29726501,29726798-29726848,
29727070-29727075
Length = 1209
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 375 PREIRNFAPAEPPR-PLLDILLYQNFERNNRDVKLVTFVVHRP 500
P +IR FA P+L L Y F RNNR V +VV P
Sbjct: 1114 PSDIRRFAETTAASWPMLWTLRYSTFRRNNR--CFVAYVVDPP 1154
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 345 AQLITAPTGRPREIRNFAPAEPPR-PLLDILLYQNFERNNR 464
A+ A P +IR FA P+L L Y F RNNR
Sbjct: 149 AETTAASWPMPSDIRRFAETTAASWPMLWTLRYSTFRRNNR 189
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 345 AQLITAPTGRPREIRNFAPAEPPR-PLLDILLYQNFERNNR 464
A+ A P +IR FA P+L L Y F RNNR
Sbjct: 286 AETTAASWPMPSDIRRFAETTAASWPMLWTLRYSTFRRNNR 326
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 345 AQLITAPTGRPREIRNFAPAEPPR-PLLDILLYQNFERNNR 464
A+ A P +IR FA P+L L Y F RNNR
Sbjct: 348 AETTAASWPMPSDIRRFAETTAASWPMLWTLRYSTFRRNNR 388
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 345 AQLITAPTGRPREIRNFAPAEPPR-PLLDILLYQNFERNNR 464
A+ A P +IR FA P+L L Y F RNNR
Sbjct: 423 AETTAASWPMPSDIRRFAETTAASWPMLWTLRYSTFRRNNR 463
>11_06_0538 +
24759030-24759379,24759380-24759488,24759604-24759692,
24760179-24760287,24760370-24760471,24760564-24760628,
24760830-24760936,24761023-24761087,24761163-24761217,
24761305-24761465
Length = 403
Score = 27.5 bits (58), Expect = 6.7
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +3
Query: 108 LLTMTPALSSKY-INTPSRLLNGFRCLMTT--AGITFFRSSGLPFLTVATIMSPEPAAGS 278
LLT P + + SRL R L AG+ FF S+ + + I+ P P++
Sbjct: 37 LLTQRPCVEGTMTMGEQSRLPESLRLLDAAFDAGVNFFDSAEMYYYAPLLILPPPPSSFP 96
Query: 279 LFR 287
LF+
Sbjct: 97 LFQ 99
>06_01_0221 + 1690978-1692171,1692265-1692276
Length = 401
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 237 TVATIMSPEPAAGSLFRRPLIPWTAITYRFFAPVLSAQLITA 362
++A + S P + + FRR L+P+ A F A S LI A
Sbjct: 160 SLAVLSSSFPPSSAAFRRELLPYMAPLLAFLAKTGSPFLINA 201
>03_05_0446 - 24414351-24414427,24414491-24414881
Length = 155
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 353 DYCSHWETQGDTEFRSRGTTTSSLRHFVV 439
D C + + D FR+RG T++SLR V+
Sbjct: 56 DDCEYGDHDDDRGFRARGFTSASLRSNVI 84
>02_04_0663 +
24820745-24821065,24821415-24821861,24821949-24822317,
24822324-24822835,24822914-24823084,24823284-24823434,
24823664-24823702
Length = 669
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 339 LSAQLITAPTGRPREIRNFAPAEPP 413
++A+ TAP GRP + FAP+ PP
Sbjct: 345 VTARPTTAPGGRPPKRPAFAPSAPP 369
>12_01_0913 +
8882193-8883510,8887633-8887865,8889619-8889871,
8891281-8891470,8891641-8891773,8891797-8891886
Length = 738
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 45 QHQHILWLQALLMAEPFISPLLLTMTPALSSKY 143
QH H+L LQ +L+ PF+ L++ TPA + K+
Sbjct: 7 QHHHVLVLQLILLL-PFLH-LVVPGTPAAARKF 37
>11_04_0068 -
13116037-13116414,13116501-13116947,13117026-13117757,
13118235-13118348
Length = 556
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 339 LSAQLITAPTGRPREIRNFAPAEPP 413
++A TAP GRP + FAP+ PP
Sbjct: 514 VTASPTTAPGGRPPKRPAFAPSAPP 538
>06_01_0004 -
59511-59576,59749-59806,60101-60144,60455-60512,
60810-60867,61165-61222,61871-61928,62225-62282,
62579-62636,62933-62990,63285-63328,63639-63696,
64699-64742,65053-65110,65407-65464,66114-66171,
66468-66818,68051-68108,68405-68462,68759-68816,
69113-69170,69466-69509,69820-70170,71048-71091,
71755-71812,72109-72291,72463-72520,72815-72858,
73877-73920,74584-74641,74938-74995,75292-75349,
75643-75700,75997-76179,76351-76408,76702-76745,
77056-77238,77410-77467,77766-77823,78120-78177,
78473-78530,78826-78869,79180-79362,79534-79591,
79885-79942,80239-80296,80592-80649,80946-81003,
81652-81709,82361-82440,83067-83124,83421-83603,
84127-84184,84480-84537,85188-85245,85541-85598,
85895-85950
Length = 1472
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 333 PVLSAQLITAPTGRPREIRNFAPAEPPR-PLLDILLYQNFERNNR 464
P+L+ L T+ G P +IR FA P+L Y F RNNR
Sbjct: 600 PILTTSLRTS-CG-PSDIRRFAETTAASWPMLWTFRYSTFRRNNR 642
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 333 PVLSAQLITAPTGRPREIRNFAPAEPPR-PLLDILLYQNFERNNR 464
P+L+ L T+ G P +IR FA P+L Y F RNNR
Sbjct: 787 PILTTSLRTS-CG-PSDIRRFAETTAASWPMLWTFRYSTFRRNNR 829
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 333 PVLSAQLITAPTGRPREIRNFAPAEPPR-PLLDILLYQNFERNNR 464
P+L+ L T+ G P +IR FA P+L Y F RNNR
Sbjct: 1147 PILTTSLRTS-CG-PSDIRRFAETTAASWPMLWTFRYSTFRRNNR 1189
>05_07_0364 - 29611149-29611211,29611441-29611623,29611796-29611853,
29612150-29612207,29612504-29612561,29612859-29612916,
29613214-29613271,29613568-29613625,29613923-29613980,
29614277-29614334,29614631-29614688,29614983-29615040,
29615337-29615394,29615691-29615748,29616045-29616102,
29616400-29616457,29616755-29616812,29617109-29617166,
29617463-29617520,29617817-29617874,29618171-29618228,
29618525-29618582,29618878-29618935,29619233-29619290,
29619942-29619999,29620297-29620376,29620649-29620706,
29621001-29621058,29621353-29621410,29621707-29621764,
29622415-29622472,29622767-29622824,29623121-29623164,
29623475-29623532,29623829-29623886,29624537-29624594,
29624889-29624946,29625243-29625300,29625597-29625654,
29626305-29626400,29626697-29626792,29627797-29627892,
29628188-29628283,29629996-29630053,29630350-29630407,
29630704-29630799,29631096-29631191,29632196-29632253,
29632549-29632644,29633648-29633743,29634040-29634042
Length = 1114
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +3
Query: 375 PREIRNFAPAEPPR-PLLDILLYQNFERNNR 464
P +IR FA P+L L Y F RNNR
Sbjct: 959 PSDIRRFAETTAASWPMLCTLRYSTFRRNNR 989
>03_02_0642 +
10086400-10086505,10086675-10087014,10087072-10087156,
10088679-10088764,10089154-10089331,10089425-10089624,
10089964-10090297
Length = 442
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +3
Query: 57 ILWLQALLMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTTAGITFFRSSGLPF 233
++ ALL A+ P +L++ PA ++ P N RC +T + RS LP+
Sbjct: 54 VMRTSALLSADQPPPPAVLSVEPATATPP-PAPKMAFNATRCSVTDGYWAYDRSKKLPY 111
>03_01_0084 +
676538-676669,677828-677959,678085-678210,678820-678882,
678964-679061,679133-679340,679859-679930,680016-680108,
680297-680398,680568-680665,681059-681140,681274-681362,
681960-682065,682145-682210,682527-682633,682907-683027,
683226-683411,683490-683789,683887-683967,684061-684225,
684297-684383,684476-684601,684750-684830,684917-684988,
685353-685364
Length = 934
Score = 27.1 bits (57), Expect = 8.8
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 330 APVLSAQ-LITAPTGRPREIRNFAPAEPPRPLLDILLYQNFERNNRDVKLVTF 485
AP+LS Q LI P+ E+ + PPR + I L R +RDV ++ F
Sbjct: 778 APLLSVQALILPPSHLKTELSSVPDTIPPRAQVQIPLEVVNLRASRDVAVLDF 830
>01_05_0287 -
20460956-20461282,20462051-20462201,20462285-20462519,
20462796-20463006,20463122-20463258,20463339-20463467,
20464558-20465359
Length = 663
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 38 AATASAHSLATGPADGRALHFALVIDYDTRI 130
AA A+A A A+GRAL+ + Y TR+
Sbjct: 224 AAAAAAARCAPAAAEGRALYTGCYLRYSTRL 254
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,611,030
Number of Sequences: 37544
Number of extensions: 365477
Number of successful extensions: 1288
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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