Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_L20
         (677 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069484-1|AAL39629.1|  261|Drosophila melanogaster LD21741p pro...    87   3e-17
AE014296-1017|AAF50741.1|  261|Drosophila melanogaster CG5537-PA...    87   3e-17
AY129436-1|AAM76178.1|  626|Drosophila melanogaster LD03595p pro...    35   0.089
AE013599-2458|AAM70875.2|  626|Drosophila melanogaster CG4798-PD...    35   0.089
AE013599-2457|AAF57871.3|  626|Drosophila melanogaster CG4798-PC...    35   0.089
AE013599-2456|AAF57872.3|  626|Drosophila melanogaster CG4798-PB...    35   0.089
AE013599-2455|AAF57873.2|  561|Drosophila melanogaster CG4798-PA...    35   0.089

>AY069484-1|AAL39629.1|  261|Drosophila melanogaster LD21741p
           protein.
          Length = 261

 Score = 86.6 bits (205), Expect = 3e-17
 Identities = 39/49 (79%), Positives = 42/49 (85%)
 Frame = -3

Query: 675 EXRIILSNLFCTPAAVQAVVDHVPKMKILTSELHPVAPNHFGQKYFGTD 529
           E  IILSNLFCTP A + VV+  PK+KILTSELHPVAPNHFGQKYFGTD
Sbjct: 213 ESCIILSNLFCTPIAARTVVNAFPKLKILTSELHPVAPNHFGQKYFGTD 261


>AE014296-1017|AAF50741.1|  261|Drosophila melanogaster CG5537-PA
           protein.
          Length = 261

 Score = 86.6 bits (205), Expect = 3e-17
 Identities = 39/49 (79%), Positives = 42/49 (85%)
 Frame = -3

Query: 675 EXRIILSNLFCTPAAVQAVVDHVPKMKILTSELHPVAPNHFGQKYFGTD 529
           E  IILSNLFCTP A + VV+  PK+KILTSELHPVAPNHFGQKYFGTD
Sbjct: 213 ESCIILSNLFCTPIAARTVVNAFPKLKILTSELHPVAPNHFGQKYFGTD 261


>AY129436-1|AAM76178.1|  626|Drosophila melanogaster LD03595p
           protein.
          Length = 626

 Score = 35.1 bits (77), Expect = 0.089
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
 Frame = -3

Query: 675 EXRIILSNLFCTPAAVQAVVDHVPKMKILTSELHP-------VAP--NHFGQKYFGTD 529
           E  IIL++L      V ++    PK+KI+TS L P       V P   +FG +YFGT+
Sbjct: 564 EDNIILASLLMAEIGVHSIAYAFPKVKIVTSALDPEINSKFYVIPGIGNFGDRYFGTE 621


>AE013599-2458|AAM70875.2|  626|Drosophila melanogaster CG4798-PD,
           isoform D protein.
          Length = 626

 Score = 35.1 bits (77), Expect = 0.089
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
 Frame = -3

Query: 675 EXRIILSNLFCTPAAVQAVVDHVPKMKILTSELHP-------VAP--NHFGQKYFGTD 529
           E  IIL++L      V ++    PK+KI+TS L P       V P   +FG +YFGT+
Sbjct: 564 EDNIILASLLMAEIGVHSIAYAFPKVKIVTSALDPEINSKFYVIPGIGNFGDRYFGTE 621


>AE013599-2457|AAF57871.3|  626|Drosophila melanogaster CG4798-PC,
           isoform C protein.
          Length = 626

 Score = 35.1 bits (77), Expect = 0.089
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
 Frame = -3

Query: 675 EXRIILSNLFCTPAAVQAVVDHVPKMKILTSELHP-------VAP--NHFGQKYFGTD 529
           E  IIL++L      V ++    PK+KI+TS L P       V P   +FG +YFGT+
Sbjct: 564 EDNIILASLLMAEIGVHSIAYAFPKVKIVTSALDPEINSKFYVIPGIGNFGDRYFGTE 621


>AE013599-2456|AAF57872.3|  626|Drosophila melanogaster CG4798-PB,
           isoform B protein.
          Length = 626

 Score = 35.1 bits (77), Expect = 0.089
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
 Frame = -3

Query: 675 EXRIILSNLFCTPAAVQAVVDHVPKMKILTSELHP-------VAP--NHFGQKYFGTD 529
           E  IIL++L      V ++    PK+KI+TS L P       V P   +FG +YFGT+
Sbjct: 564 EDNIILASLLMAEIGVHSIAYAFPKVKIVTSALDPEINSKFYVIPGIGNFGDRYFGTE 621


>AE013599-2455|AAF57873.2|  561|Drosophila melanogaster CG4798-PA,
           isoform A protein.
          Length = 561

 Score = 35.1 bits (77), Expect = 0.089
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
 Frame = -3

Query: 675 EXRIILSNLFCTPAAVQAVVDHVPKMKILTSELHP-------VAP--NHFGQKYFGTD 529
           E  IIL++L      V ++    PK+KI+TS L P       V P   +FG +YFGT+
Sbjct: 499 EDNIILASLLMAEIGVHSIAYAFPKVKIVTSALDPEINSKFYVIPGIGNFGDRYFGTE 556


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,443,273
Number of Sequences: 53049
Number of extensions: 447993
Number of successful extensions: 803
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)