Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_L19
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    25   0.83 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    24   1.4  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    24   1.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   3.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   5.8  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 641 YVTGYTMLMYDTIFVP*INGSYLRPL 718
           YV+GY   + D   +P +   YLRPL
Sbjct: 16  YVSGYLENIRDRRVLPTVEPGYLRPL 41


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 381 EGCTVFTKQSVTKNGKGMFKWLSN 452
           EGC  F ++S+TKN     K+ +N
Sbjct: 206 EGCKGFFRRSITKNAVYQCKYGNN 229


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -1

Query: 252 IWS*SSKLTNRV--ISPY*HTYLCAIFFVLLWTXLFGL 145
           +W   SKL   V   S Y  T+LC   F+++   ++GL
Sbjct: 269 LWMLLSKLIRDVGNASGYTVTFLCLYLFLIITLTIYGL 306


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 285 LLYDLLNASTKKSRVNY 335
           +LY LL   ++KSR+NY
Sbjct: 45  VLYTLLFGRSRKSRMNY 61


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 4/12 (33%), Positives = 10/12 (83%)
 Frame = +1

Query: 646 YWLYHAYVRYYL 681
           YWL+H ++ +++
Sbjct: 599 YWLFHCHIEFHV 610


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,044
Number of Sequences: 336
Number of extensions: 3291
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)