Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_L14
         (509 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    24   0.68 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.68 

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.68
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 94  TLTLSIVKCAYANLAALNTCV 32
           TL L + KC  ++L++L TC+
Sbjct: 227 TLILILAKCITSSLSSLYTCI 247


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.68
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 214 FVRYTLHAHDTLCIYY*YIERLNF 143
           F+ +T+H    +CIYY Y   L F
Sbjct: 245 FILFTVHLLLLVCIYYFYYMHLLF 268



 Score = 24.2 bits (50), Expect = 0.68
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 214 FVRYTLHAHDTLCIYY*Y 161
           F+ +T+H    LCIYY Y
Sbjct: 272 FIIFTMHLLFLLCIYYFY 289



 Score = 23.0 bits (47), Expect = 1.6
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 353 LIFTTNIRLFGSIFLLYCIKCTKIIV*YSNYICNVFII 240
           +IFT ++ LF  +  +Y   C  II+    Y C  FII
Sbjct: 273 IIFTMHL-LF--LLCIYYFYCALIILLCIYYFCRAFII 307



 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 214 FVRYTLHAHDTLCIYY 167
           F+ +T+H    LCIYY
Sbjct: 120 FIIFTVHLLFLLCIYY 135



 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 217 CFVRYTLHAHDTLCIYY*Y 161
           C   +TLH     CIYY Y
Sbjct: 198 CLDYFTLHLLFLPCIYYFY 216



 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 214 FVRYTLHAHDTLCIYY 167
           F+ +T+H    LCIY+
Sbjct: 153 FIIFTVHLLFLLCIYH 168


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,501
Number of Sequences: 336
Number of extensions: 2489
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)