Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_L14
(509 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U89916-1|AAC79506.1| 228|Homo sapiens claudin-10 protein. 29 9.4
CR456845-1|CAG33126.1| 228|Homo sapiens CLDN10 protein. 29 9.4
BC095456-1|AAH95456.1| 144|Homo sapiens ELOVL1 protein protein. 29 9.4
BC010920-1|AAH10920.1| 228|Homo sapiens claudin 10 protein. 29 9.4
BC000618-1|AAH00618.1| 279|Homo sapiens elongation of very long... 29 9.4
AL357061-1|CAI16403.1| 226|Homo sapiens claudin 10 protein. 29 9.4
AL139376-3|CAH71598.1| 73|Homo sapiens claudin 10 protein. 29 9.4
AL139376-2|CAH71597.1| 228|Homo sapiens claudin 10 protein. 29 9.4
AL139376-1|CAH71596.1| 226|Homo sapiens claudin 10 protein. 29 9.4
AL139289-4|CAB92758.1| 279|Homo sapiens elongation of very long... 29 9.4
AK222498-1|BAD96218.1| 279|Homo sapiens elongation of very long... 29 9.4
AK055855-1|BAB71030.1| 226|Homo sapiens protein ( Homo sapiens ... 29 9.4
AK001653-1|BAA91813.1| 279|Homo sapiens protein ( Homo sapiens ... 29 9.4
AF336793-1|AAL71993.1| 279|Homo sapiens SSC1/ELOVL1 protein. 29 9.4
AF151846-1|AAD34083.1| 200|Homo sapiens CGI-88 protein protein. 29 9.4
>U89916-1|AAC79506.1| 228|Homo sapiens claudin-10 protein.
Length = 228
Score = 29.1 bits (62), Expect = 9.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 353 LIFTTNIRLFGSIFLLYCIKCTKI 282
+I ++ FGSIF L+ +KCTK+
Sbjct: 83 MIAAVSLGFFGSIFALFGMKCTKV 106
>CR456845-1|CAG33126.1| 228|Homo sapiens CLDN10 protein.
Length = 228
Score = 29.1 bits (62), Expect = 9.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 353 LIFTTNIRLFGSIFLLYCIKCTKI 282
+I ++ FGSIF L+ +KCTK+
Sbjct: 83 MIAAVSLGFFGSIFALFGMKCTKV 106
>BC095456-1|AAH95456.1| 144|Homo sapiens ELOVL1 protein protein.
Length = 144
Score = 29.1 bits (62), Expect = 9.4
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +1
Query: 154 VQCISNKYKEYHEHAMYSVQNISLLNSPTIIKTLQI*LLY*TMILVHLIQYNKK 315
++ + N Y+E +HA +Q L+ SP ++ ++ + +Y + L I N+K
Sbjct: 1 MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRK 54
>BC010920-1|AAH10920.1| 228|Homo sapiens claudin 10 protein.
Length = 228
Score = 29.1 bits (62), Expect = 9.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 353 LIFTTNIRLFGSIFLLYCIKCTKI 282
+I ++ FGSIF L+ +KCTK+
Sbjct: 83 MIAAVSLGFFGSIFALFGMKCTKV 106
>BC000618-1|AAH00618.1| 279|Homo sapiens elongation of very long
chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1
protein.
Length = 279
Score = 29.1 bits (62), Expect = 9.4
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +1
Query: 154 VQCISNKYKEYHEHAMYSVQNISLLNSPTIIKTLQI*LLY*TMILVHLIQYNKK 315
++ + N Y+E +HA +Q L+ SP ++ ++ + +Y + L I N+K
Sbjct: 1 MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRK 54
>AL357061-1|CAI16403.1| 226|Homo sapiens claudin 10 protein.
Length = 226
Score = 29.1 bits (62), Expect = 9.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 353 LIFTTNIRLFGSIFLLYCIKCTKI 282
+I ++ FGSIF L+ +KCTK+
Sbjct: 81 MIAAVSLGFFGSIFALFGMKCTKV 104
>AL139376-3|CAH71598.1| 73|Homo sapiens claudin 10 protein.
Length = 73
Score = 29.1 bits (62), Expect = 9.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 353 LIFTTNIRLFGSIFLLYCIKCTKI 282
+I ++ FGSIF L+ +KCTK+
Sbjct: 1 MIAAVSLGFFGSIFALFGMKCTKV 24
>AL139376-2|CAH71597.1| 228|Homo sapiens claudin 10 protein.
Length = 228
Score = 29.1 bits (62), Expect = 9.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 353 LIFTTNIRLFGSIFLLYCIKCTKI 282
+I ++ FGSIF L+ +KCTK+
Sbjct: 83 MIAAVSLGFFGSIFALFGMKCTKV 106
>AL139376-1|CAH71596.1| 226|Homo sapiens claudin 10 protein.
Length = 226
Score = 29.1 bits (62), Expect = 9.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 353 LIFTTNIRLFGSIFLLYCIKCTKI 282
+I ++ FGSIF L+ +KCTK+
Sbjct: 81 MIAAVSLGFFGSIFALFGMKCTKV 104
>AL139289-4|CAB92758.1| 279|Homo sapiens elongation of very long
chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1
protein.
Length = 279
Score = 29.1 bits (62), Expect = 9.4
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +1
Query: 154 VQCISNKYKEYHEHAMYSVQNISLLNSPTIIKTLQI*LLY*TMILVHLIQYNKK 315
++ + N Y+E +HA +Q L+ SP ++ ++ + +Y + L I N+K
Sbjct: 1 MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRK 54
>AK222498-1|BAD96218.1| 279|Homo sapiens elongation of very long
chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1
protein.
Length = 279
Score = 29.1 bits (62), Expect = 9.4
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +1
Query: 154 VQCISNKYKEYHEHAMYSVQNISLLNSPTIIKTLQI*LLY*TMILVHLIQYNKK 315
++ + N Y+E +HA +Q L+ SP ++ ++ + +Y + L I N+K
Sbjct: 1 MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRK 54
>AK055855-1|BAB71030.1| 226|Homo sapiens protein ( Homo sapiens
cDNA FLJ31293 fis, clone KIDNE2007569, moderately
similar to CLAUDIN-10. ).
Length = 226
Score = 29.1 bits (62), Expect = 9.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 353 LIFTTNIRLFGSIFLLYCIKCTKI 282
+I ++ FGSIF L+ +KCTK+
Sbjct: 81 MIAAVSLGFFGSIFALFGMKCTKV 104
>AK001653-1|BAA91813.1| 279|Homo sapiens protein ( Homo sapiens
cDNA FLJ10791 fis, clone NT2RP4000556, weakly similar to
SUR4 PROTEIN. ).
Length = 279
Score = 29.1 bits (62), Expect = 9.4
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +1
Query: 154 VQCISNKYKEYHEHAMYSVQNISLLNSPTIIKTLQI*LLY*TMILVHLIQYNKK 315
++ + N Y+E +HA +Q L+ SP ++ ++ + +Y + L I N+K
Sbjct: 1 MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRK 54
>AF336793-1|AAL71993.1| 279|Homo sapiens SSC1/ELOVL1 protein.
Length = 279
Score = 29.1 bits (62), Expect = 9.4
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +1
Query: 154 VQCISNKYKEYHEHAMYSVQNISLLNSPTIIKTLQI*LLY*TMILVHLIQYNKK 315
++ + N Y+E +HA +Q L+ SP ++ ++ + +Y + L I N+K
Sbjct: 1 MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRK 54
>AF151846-1|AAD34083.1| 200|Homo sapiens CGI-88 protein protein.
Length = 200
Score = 29.1 bits (62), Expect = 9.4
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +1
Query: 154 VQCISNKYKEYHEHAMYSVQNISLLNSPTIIKTLQI*LLY*TMILVHLIQYNKK 315
++ + N Y+E +HA +Q L+ SP ++ ++ + +Y + L I N+K
Sbjct: 1 MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRK 54
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,591,327
Number of Sequences: 237096
Number of extensions: 1081270
Number of successful extensions: 1641
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1641
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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