Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_L14
         (509 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50873-1|CAA90760.2|  961|Caenorhabditis elegans Hypothetical pr...    27   7.9  
X92564-1|CAA63314.1|  961|Caenorhabditis elegans LIN-2A protein.       27   7.9  

>Z50873-1|CAA90760.2|  961|Caenorhabditis elegans Hypothetical
           protein F17E5.1a protein.
          Length = 961

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = -1

Query: 107 IYRQHIDI----VNSKVRVCQSCSTQYLCCFSNTI 15
           ++RQH  +    ++ ++R+CQ+    Y+C    TI
Sbjct: 52  LFRQHTGLGFEEIDEEIRICQNLQHPYICRLEKTI 86


>X92564-1|CAA63314.1|  961|Caenorhabditis elegans LIN-2A protein.
          Length = 961

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = -1

Query: 107 IYRQHIDI----VNSKVRVCQSCSTQYLCCFSNTI 15
           ++RQH  +    ++ ++R+CQ+    Y+C    TI
Sbjct: 52  LFRQHTGLGFEEIDEEIRICQNLQHPYICRLEKTI 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,905,015
Number of Sequences: 27780
Number of extensions: 210371
Number of successful extensions: 467
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)