Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_L13
(560 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74043-5|CAA98544.1| 588|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.75
AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical ... 30 0.99
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 29 3.0
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 29 3.0
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 3.0
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 28 4.0
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 28 4.0
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 27 9.2
>Z74043-5|CAA98544.1| 588|Caenorhabditis elegans Hypothetical
protein T19B10.9 protein.
Length = 588
Score = 31.1 bits (67), Expect = 0.57
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -1
Query: 206 PHP-ECLHPPSFQCSSDGEVGPQVVPEARLQLPTHTAQVEEASPQATPPP 60
P P E PP S P VP + +P + A ++++ P A PPP
Sbjct: 15 PGPGEACQPPMPASSFQNNGVPMTVPSSPQYIPANGAPLDQSGPIAPPPP 64
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 0.75
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 49 GSTVGGGVACGDASSTCAVCVGNCSRASGTTCGPTSPSEEHWKEGGCRHSGWG 207
G GGG CG C G C G G P GGC G G
Sbjct: 76 GGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGG 128
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 49 GSTVGGGVACGDASSTCAVCVGNCSRASGTTCG 147
G GGG CG C G C G CG
Sbjct: 147 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCG 179
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 0.75
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +1
Query: 49 GSTVGGGVACGDASSTCAVCVGNCSRASGTTC-GPTSPSEEHWKEGGCRHSGWG 207
G GGG CG C G C G C G +S GGC G G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGG 161
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 0.75
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +1
Query: 49 GSTVGGGVACGDASSTCAVCVGNCSRASGTTC-GPTSPSEEHWKEGGCRHSGWG 207
G GGG CG C G C G C G +S GGC G G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGG 161
>AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical
protein W08E12.2 protein.
Length = 120
Score = 30.3 bits (65), Expect = 0.99
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 46 SGSTVGGGVACGDASSTCAVCVGNCSRASGTTCGP 150
S GGG G C C GN +G CGP
Sbjct: 17 SAQCFGGGCGGGCFGGNCGGCSGNNCGCNGNNCGP 51
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 28.7 bits (61), Expect = 3.0
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Frame = -1
Query: 206 PHPECLHPPSFQCSSDGEV---GPQVVPEARLQLPTHTAQV--EEASPQA--TPPPTVDP 48
P P PP+ + + P+ PEA Q+P TAQ+ E A P+A P PT P
Sbjct: 375 PPPPAPPPPAPAVPEEAQAPTPAPEEAPEA--QIPAETAQIPPENAVPEAPEEPAPTTTP 432
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 28.7 bits (61), Expect = 3.0
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Frame = -1
Query: 206 PHPECLHPPSFQCSSDGEV---GPQVVPEARLQLPTHTAQV--EEASPQA--TPPPTVDP 48
P P PP+ + + P+ PEA Q+P TAQ+ E A P+A P PT P
Sbjct: 387 PPPPAPPPPAPAVPEEAQAPTPAPEEAPEA--QIPAETAQIPPENAVPEAPEEPAPTTTP 444
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +1
Query: 49 GSTVGGGVACGDASSTCAVCVGNCSRASGTTCGPTSPSEEH 171
G GGG +CG ++ C G S + C P + + H
Sbjct: 2136 GGCSGGGNSCGGGCNSGGSCGGGGGGCSSSCCQPQTSATSH 2176
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
C47E8.8 protein.
Length = 1675
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 134 PEARLQLPTHTAQVEEASPQATPPPTVDPDRTKN 33
PEA++ L T T + EAS P P +D + +N
Sbjct: 1047 PEAQIPLETRTLEPSEAS-SVQPEPPIDQEEAEN 1079
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 134 PEARLQLPTHTAQVEEASPQATPPPTVDPDRTKN 33
PEA++ L T T + EAS P P +D + +N
Sbjct: 1047 PEAQIPLETRTLEPSEAS-SVQPEPPIDQEEAEN 1079
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -1
Query: 203 HPECLHPPSFQCSSDGEVGPQVVPEARLQLPTHTAQVEEASPQATPPPTVDPDR 42
HP PP Q + E P +P+ + P TA A+P AT PT DP +
Sbjct: 217 HPPA--PPIRQAAHAAESSPPPIPQRKSSAPAPTA----AAPPATKEPT-DPKK 263
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 531 YIPDRRRQTLADTXYVPXQENEVYYPQQPEN 439
Y P R++Q Y P Q+ + Y QQ +N
Sbjct: 53 YPPQRQQQQYNMNAYAPRQQQQQQYQQQQQN 83
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 119 QLPTHTAQVEEASPQATPPPTVDPDRTKNCKP*T 18
Q+P Q + +P+ T PPT P T N P T
Sbjct: 763 QVPLPVVQTTQTAPKPTLPPTTLPVLTTNKTPRT 796
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,903,829
Number of Sequences: 27780
Number of extensions: 206368
Number of successful extensions: 991
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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